RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 AP1S2P56377 157 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 FOXL2P58012 376 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 RAB10P61026 200 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 NAE1Q13564 534 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 PHKG1Q16816 387 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 DCAF10Q5QP82 559 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 GARNL3Q5VVW2 1013 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 CAPN13Q6MZZ7 669 aaPredicted RBP14.61□□□□□ -0.07
NUP50-219ENST00000497960 MBOAT1Q6ZNC8 495 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 COX15Q7KZN9 410 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 PPP1R32Q7Z5V6 425 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 CMC1Q7Z7K0 106 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 C17orf64Q86WR6 236 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 MREGQ8N565 214 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 FDCSPQ8NFU4 85 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 MVB12AQ96EY5 273 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 VPS50Q96JG6 964 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 CLMPQ9H6B4 373 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 CUEDC1Q9NWM3 386 aaPredicted RBP14.61□□□□□ -0.07
NUP50-219ENST00000497960 ARL15Q9NXU5 204 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 CTSFQ9UBX1 484 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 ZNF282Q9UDV7 671 aaPredicted RBP14.61□□□□□ -0.07
NUP50-219ENST00000497960 FETUBQ9UGM5 382 aa14.61□□□□□ -0.07
NUP50-219ENST00000497960 RUVBL1Q9Y265 456 aaKnown RBP14.61□□□□□ -0.07
NUP50-219ENST00000497960 MED26O95402 600 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 ANXA5P08758 320 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 ENO2P09104 434 aaPredicted RBP14.6□□□□□ -0.07
NUP50-219ENST00000497960 NUDT17P0C025 328 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 FBLP22087 321 aaKnown RBP14.6□□□□□ -0.07
NUP50-219ENST00000497960 RPS15AP62244 130 aaKnown RBP14.6□□□□□ -0.07
NUP50-219ENST00000497960 NDUFA9Q16795 377 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 HKDC1Q2TB90 917 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 HPS6Q86YV9 775 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 PLD3Q8IV08 490 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 CEP97Q8IW35 865 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 DTWD1Q8N5C7 304 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 NKAPQ8N5F7 415 aaKnown RBP14.6□□□□□ -0.07
NUP50-219ENST00000497960 EPS8L3Q8TE67 593 aaKnown RBP14.6□□□□□ -0.07
NUP50-219ENST00000497960 ATL1Q8WXF7 558 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 MIEF2Q96C03 454 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 THAP11Q96EK4 314 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 PDLIM5Q96HC4 596 aaKnown RBP14.6□□□□□ -0.07
NUP50-219ENST00000497960 C10orf90Q96M02 699 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 SPSB2Q99619 263 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 HAUS8Q9BT25 410 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 SOX17Q9H6I2 414 aaPredicted RBP14.6□□□□□ -0.07
NUP50-219ENST00000497960 PPCSQ9HAB8 311 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 ATP13A2Q9NQ11 1180 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 SNX15Q9NRS6 342 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 SEMA3GQ9NS98 782 aa14.6□□□□□ -0.07
NUP50-219ENST00000497960 MDC1Q14676 2089 aaKnown RBP14.6□□□□□ -0.07
NUP50-219ENST00000497960 IQANK1A0A1B0GTG1 560 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 VSTM2BA6NLU5 285 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 TRIM49D1C9J1S8 452 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 AGPSO00116 658 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 DPM1O60762 260 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 SNRPAP09012 282 aaKnown RBP14.59□□□□□ -0.07
NUP50-219ENST00000497960 GCAP28676 217 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 GRK3P35626 688 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 SLCO1A2P46721 670 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 ZKSCAN8Q15776 578 aaPredicted RBP14.59□□□□□ -0.07
NUP50-219ENST00000497960 RBBP7Q16576 425 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 COLEC12Q5KU26 742 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 LGSNQ5TDP6 509 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 VWA5B1Q5TIE3 1220 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 LCTLQ6UWM7 567 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 SHISA6Q6ZSJ9 500 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 TBC1D1Q86TI0 1168 aaPredicted RBP14.59□□□□□ -0.07
NUP50-219ENST00000497960 OR2W6PQ8NHA6 318 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 STT3BQ8TCJ2 826 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 CRB3Q9BUF7 120 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 NUDT9Q9BW91 350 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 YIPF2Q9BWQ6 316 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 SGPP1Q9BX95 441 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 DRC3Q9H069 523 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 ARGLU1Q9NWB6 273 aaPredicted RBP14.59□□□□□ -0.07
NUP50-219ENST00000497960 CTNNAL1Q9UBT7 734 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 TBK1Q9UHD2 729 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 FBXL4Q9UKA2 621 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 PLAAQ9Y263 795 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 CNTRLQ7Z7A1 2325 aa14.59□□□□□ -0.07
NUP50-219ENST00000497960 KCNE1BA0A087WTH5 132 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 NPEPPSL1A6NEC2 478 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 ZIC2O95409 532 aaPredicted RBP14.58□□□□□ -0.08
NUP50-219ENST00000497960 GUCA1CO95843 209 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 ALPPP05187 535 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 ZGLP1P0C6A0 271 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 CRABP2P29373 138 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 TYK2P29597 1187 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 CSNK1G2P78368 415 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 AIMP2Q13155 320 aaKnown RBP14.58□□□□□ -0.08
NUP50-219ENST00000497960 RAPSNQ13702 412 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 DSG2Q14126 1118 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 FAM53BQ14153 422 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 MYBPC3Q14896 1274 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 ADGRD1Q6QNK2 874 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 TMEM151BQ8IW70 566 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 PRSS58Q8IYP2 241 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 GALNT16Q8N428 558 aa14.58□□□□□ -0.08
NUP50-219ENST00000497960 ANKRD7Q92527 254 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms