RNA–Protein interactions for RNA: ENST00000497586.5

SFMBT1-208, Transcript of Scm like with four mbt domains 1, human

TSL 4

Gene SFMBT1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFMBT1-208	ENST00000497586	ZNF358	Q9NW07	568 aa		12.84	□□□□□ -0.35
SFMBT1-208	ENST00000497586	UTP6	Q9NYH9	597 aa	Known RBP	12.84	□□□□□ -0.35
SFMBT1-208	ENST00000497586	PCYOX1	Q9UHG3	505 aa		12.84	□□□□□ -0.35
SFMBT1-208	ENST00000497586	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
SFMBT1-208	ENST00000497586	HRH3	Q9Y5N1	445 aa		12.84	□□□□□ -0.35
SFMBT1-208	ENST00000497586	USP27X	A6NNY8	438 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PRMT5	O14744	637 aa	Predicted RBP	12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	CCNDBP1	O95273	360 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	MBD3	O95983	291 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	TFEB	P19484	476 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	RPA3	P35244	121 aa	Predicted RBP	12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	XCR1	P46094	333 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	MEOX1	P50221	254 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	HADHB	P55084	474 aa	Known RBP	12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	RELA	Q04206	551 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	SEMA3A	Q14563	771 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PARP6	Q2NL67	630 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	P3H1	Q32P28	736 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	FASTKD1	Q53R41	847 aa	Known RBP	12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	SFT2D3	Q587I9	215 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	AARS2	Q5JTZ9	985 aa	Known RBP	12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ACAD11	Q709F0	780 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ZNF534	Q76KX8	674 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PCGF5	Q86SE9	256 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	CCDC71	Q8IV32	467 aa	Predicted RBP	12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	RPRML	Q8N4K4	120 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	MYRIP	Q8NFW9	859 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	OR9A4	Q8NGU2	314 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	OR4L1	Q8NH43	312 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	SMPDL3A	Q92484	453 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	KRT35	Q92764	455 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	LPAR4	Q99677	370 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	LIME1	Q9H400	295 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	SLC2A6	Q9UGQ3	507 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	INTU	Q9ULD6	942 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	EDAR	Q9UNE0	448 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	EFR3B	Q9Y2G0	817 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PLEKHA6	Q9Y2H5	1048 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	L3MBTL1	Q9Y468	752 aa		12.83	□□□□□ -0.36
SFMBT1-208	ENST00000497586	NDC80	O14777	642 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	KPNA5	O15131	536 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	CDC40	O60508	579 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PRMT3	O60678	531 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	METTL18	O95568	372 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	TPP2	P29144	1249 aa	Predicted RBP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PTPN7	P35236	360 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	CYB561	P49447	251 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	NUP107	P57740	925 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	SNRPN	P63162	240 aa	Known RBP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ADAM8	P78325	824 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ACVR1	Q04771	509 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	USP10	Q14694	798 aa	Known RBP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	CMPK2	Q5EBM0	449 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	TSTD2	Q5T7W7	516 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ICE2	Q659A1	982 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PTRHD1	Q6GMV3	140 aa	Known RBP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ARHGAP11A	Q6P4F7	1023 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	SUSD1	Q6UWL2	747 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	OTOA	Q7RTW8	1153 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	LINC00523	Q86TU6	105 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ZNF227	Q86WZ6	799 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	OR8K1	Q8NGG5	319 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	OR51Q1	Q8NH59	317 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	MCOLN3	Q8TDD5	553 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	TMEM125	Q96AQ2	219 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	MBD6	Q96DN6	1003 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	CCDC42	Q96M95	316 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	GPATCH1	Q9BRR8	931 aa	Known RBP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	CLEC4M	Q9H2X3	399 aa	Predicted RBP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	CDCP1	Q9H5V8	836 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PLSCR2	Q9NRY7	297 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	HCN3	Q9P1Z3	774 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	TAC3	Q9UHF0	121 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	RIMKLB	Q9ULI2	386 aa		12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.82	□□□□□ -0.36
SFMBT1-208	ENST00000497586	OR2W5	A6NFC9	320 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	HAT1	O14929	419 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PROM1	O43490	865 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	HS6ST1	O60243	411 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	C8B	P07358	591 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	SLC26A5	P58743	744 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PRAME	P78395	509 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PRDX1	Q06830	199 aa	Known RBP	12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	TSTA3	Q13630	321 aa	Predicted RBP	12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ARHGAP19	Q14CB8	494 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ABRAXAS2	Q15018	415 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	C11orf63	Q6NUN7	778 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	PRSS41	Q7RTY9	318 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	RPS19BP1	Q86WX3	136 aa	Known RBP	12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	SHISA5	Q8N114	240 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	OR9A1P	Q8NGU1	263 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	OR6P1	Q8NGX9	317 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ELP5	Q8TE02	316 aa		12.81	□□□□□ -0.36
SFMBT1-208	ENST00000497586	ARSG	Q96EG1	525 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms