RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CDH12P55289 794 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 PSPHP78330 225 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 SOX4Q06945 474 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 VGLL4Q14135 290 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 TAF12Q16514 161 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 CPSF6Q16630 551 aaKnown RBP eCLIP12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 DEFB132Q7Z7B7 95 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 ZZZ3Q8IYH5 903 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 TCTE3Q8IZS6 198 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 TESCQ96BS2 214 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 PSKH2Q96QS6 385 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 ERVMER34-1Q9H9K5 563 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 ATP6V1HQ9UI12 483 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 MGAT4AQ9UM21 535 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 UBQLN1Q9UMX0 589 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 NDRG2Q9UN36 371 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 TNFRSF11BO00300 401 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 VPS26AO75436 327 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 CCNDBP1O95273 360 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 PSMA1P25786 263 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 ETV6P41212 452 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 HSPA14Q0VDF9 509 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 GTF2H2Q13888 395 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 DOC2BQ14184 412 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 IHHQ14623 411 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 DGKKQ5KSL6 1271 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 OR4F3Q6IEY1 312 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 GTF2H2CQ6P1K8 395 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 FAM171BQ6P995 826 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 RNF130Q86XS8 419 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 RDH10Q8IZV5 341 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 PSMG2Q969U7 264 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 HRASLS5Q96KN8 279 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 ZFP42Q96MM3 310 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 SIGLEC11Q96RL6 698 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 LRTM1Q9HBL6 345 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 TXNRD2Q9NNW7 524 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 CLEC2DQ9UHP7 191 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 TRAPPC4Q9Y296 219 aa12.65□□□□□ -0.38
GAPVD1-220ENST00000497580 ANK1P16157 1881 aa12.65□□□□□ -0.39
GAPVD1-220ENST00000497580 LCHNA4D1U4 455 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 PLA2G10O15496 165 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 RGS14O43566 566 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 SH3BGRLO75368 114 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 GLUD1P00367 558 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ESR1P03372 595 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 GGT2P36268 569 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 IL2P60568 153 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 IL18Q14116 193 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 FAM187BQ17R55 369 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ZRANB3Q5FWF4 1079 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 C22orf42Q6IC83 251 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 OR10G2Q8NGC3 310 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 OR9Q2Q8NGE9 314 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 HMCESQ96FZ2 354 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 TMEM80Q96HE8 168 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 QRFPRQ96P65 431 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 WACQ9BTA9 647 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 TRAF4Q9BUZ4 470 aaPredicted RBP12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ABHD16BQ9H3Z7 469 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 NSUN3Q9H649 340 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 EIF3KQ9UBQ5 218 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ISM1B1AKI9 464 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 TEX46H3BTG2 121 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 GABRDO14764 452 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ALPPP05187 535 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 HAPLN1P10915 354 aaPredicted RBP12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 STC1P52823 247 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 AIF1P55008 147 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 SPIBQ01892 262 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ASAH1Q13510 395 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 UGT8Q16880 541 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ZBTB37Q5TC79 503 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 OR4K2Q8NGD2 314 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 DPF3Q92784 378 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ZNF382Q96SR6 550 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 CPPED1Q9BRF8 314 aaPredicted RBP12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 NIPAL2Q9H841 368 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 C11orf16Q9NQ32 467 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 TMEM184CQ9NVA4 438 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 RDH8Q9NYR8 311 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 PRKAB1Q9Y478 270 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 RPP40O75818 363 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 IL6P05231 212 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ADRA2AP08913 450 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 GNPDA1P46926 289 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 CSNK2BP67870 215 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ABATP80404 500 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 RHAGQ02094 409 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 TTLL4Q14679 1199 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ATG9BQ674R7 924 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 PTCHD4Q6ZW05 846 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ZNF367Q7RTV3 350 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 ZNF680Q8NEM1 530 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 CHST13Q8NET6 341 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 MAL2Q969L2 176 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 FBXW5Q969U6 566 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 REPS1Q96D71 796 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 PCED1BQ96HM7 432 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 EXOC2Q96KP1 924 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms