RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TRNAU1APQ9NX07 287 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 UTP6Q9NYH9 597 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 TESQ9UGI8 421 aaKnown RBP5.76□□□□□ -1.49
BRCA1-224ENST00000497488 KLK4Q9Y5K2 254 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 DISP3Q9P2K9 1392 aa5.76□□□□□ -1.49
BRCA1-224ENST00000497488 PFASO15067 1338 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 SF3B1O75533 1304 aaKnown RBP eCLIP5.75□□□□□ -1.491e-9■■■■■ 99.9
BRCA1-224ENST00000497488 ALKQ9UM73 1620 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 SLC22A23A1A5C7 686 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 GSAPA4D1B5 854 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ANKRD30BLA7E2S9 258 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 FAM90A26D6RGX4 464 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 E9PI62 339 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 POLR3GO15318 223 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 RNF113AO15541 343 aaKnown RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 FOXS1O43638 330 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 NOBOXO60393 691 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 FOXD2O60548 495 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 SNNO75324 88 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 PDE9AO76083 593 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 RRASP10301 218 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 DLATP10515 647 aaKnown RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 HTR2AP28223 471 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 MMP15P51511 669 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 PRMT2P55345 433 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 MAT1AQ00266 395 aaKnown RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 GUCY1B3Q02153 619 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 CRHR2Q13324 411 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 VEZF1Q14119 521 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 DOC2AQ14183 400 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 SQLEQ14534 574 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 RFTN1Q14699 578 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 STK11Q15831 433 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ADPRMQ3LIE5 342 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ZNF770Q6IQ21 691 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 CD164L2Q6UWJ8 174 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 FAM159AQ6UWV7 190 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 PAQR9Q6ZVX9 377 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 EFL1Q7Z2Z2 1120 aaKnown RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ATG9AQ7Z3C6 839 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 DGLUCYQ7Z3D6 616 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ERASQ7Z444 233 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 BNIPLQ7Z465 357 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 NANOGNBQ7Z5D8 188 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 MB21D2Q8IYB1 491 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 THEM5Q8N1Q8 247 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ZNF321PQ8N8H1 164 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 BMPERQ8N8U9 685 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 TP53I13Q8NBR0 393 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 OR5M8Q8NGP6 311 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ZNF398Q8TD17 642 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 HAS2Q92819 552 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 TMEM18Q96B42 140 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 RASD2Q96D21 266 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 C4orf36Q96KX1 117 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 MTG1Q9BT17 334 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 HAUS8Q9BT25 410 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 MSTO1Q9BUK6 570 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ALG12Q9BV10 488 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 CDK19Q9BWU1 502 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 DPEP3Q9H4B8 488 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 EXO5Q9H790 373 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 EVA1AQ9H8M9 152 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 COG4Q9H9E3 785 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 PNRC2Q9NPJ4 139 aaKnown RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 RNF146Q9NTX7 359 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ETNK2Q9NVF9 386 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 COPS7AQ9UBW8 275 aa5.75□□□□□ -1.49
BRCA1-224ENST00000497488 MRPS2Q9Y399 296 aaKnown RBP5.75□□□□□ -1.49
BRCA1-224ENST00000497488 ADAMTS13Q76LX8 1427 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 CPS1P31327 1500 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 NEXMIFQ5QGS0 1516 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 LRRC7Q96NW7 1537 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 TRAV24A0A0B4J272 114 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 HNRNPCL2B2RXH8 293 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 RHODO00212 210 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 POLR2DO15514 142 aaKnown RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 KCNN4O15554 427 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 SPINT2O43291 252 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 LAMTOR5O43504 91 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 AKAP8O43823 692 aaKnown RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 NME2P1O60361 137 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 GMNNO75496 209 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 STBD1O95210 358 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 PLAUP00749 431 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 PROS1P07225 676 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 NUDT17P0C025 328 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 SP9P0CG40 484 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 ENO3P13929 434 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 TACR3P29371 465 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 ARRB2P32121 409 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 OR1D2P34982 312 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 CAPGP40121 348 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 RPL21P46778 160 aaKnown RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 SLC1A6P48664 564 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 SUCLG1P53597 346 aaKnown RBP5.74□□□□□ -1.49
BRCA1-224ENST00000497488 ACY1Q03154 408 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 FOXM1Q08050 763 aa5.74□□□□□ -1.49
BRCA1-224ENST00000497488 ILF2Q12905 390 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms