RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 FOXE1O00358 373 aaPredicted RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 SLC30A4O14863 429 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 HDAC3O15379 428 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 RGS14O43566 566 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 VPS4BO75351 444 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 SLC35G6P0C7Q6 338 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 MSL3P1P0C860 447 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 KITP10721 976 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 PCNAP12004 261 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 ST6GAL1P15907 406 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 CCR10P46092 362 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 SCTRP47872 440 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 GFERP55789 205 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 CSTF3Q12996 717 aaKnown RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 IMPG1Q17R60 797 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 CES4AQ5XG92 561 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 FCRL6Q6DN72 434 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 RBM44Q6ZP01 1051 aaKnown RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 CHSY3Q70JA7 882 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 DDIASQ8IXT1 998 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 LRRC34Q8IZ02 419 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 DCBLD1Q8N8Z6 715 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 MFSD9Q8NBP5 474 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 CAMKVQ8NCB2 501 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 WDR20Q8TBZ3 569 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 AGR3Q8TD06 166 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 KLHL6Q8WZ60 621 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 SLC41A2Q96JW4 573 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 ZNF317Q96PQ6 595 aaPredicted RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 STRADBQ9C0K7 418 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 EPN3Q9H201 632 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 RHBGQ9H310 441 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 ZNF768Q9H5H4 540 aaKnown RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 ZNF395Q9H8N7 513 aaPredicted RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 BRF2Q9HAW0 419 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 FANCEQ9HB96 536 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 FGFR1OP2Q9NVK5 253 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 RIC8BQ9NVN3 520 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 PNPOQ9NVS9 261 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 ZFP69BQ9UJL9 534 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 CDV3Q9UKY7 258 aaKnown RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 ATXN7L1Q9ULK2 861 aaPredicted RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 ZNF490Q9ULM2 529 aaPredicted RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 PPT2Q9UMR5 302 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 PLCL2Q9UPR0 1127 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 SH2B3Q9UQQ2 575 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 BTRCQ9Y297 605 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 FIS1Q9Y3D6 152 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 TIMM22Q9Y584 194 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 AP1M2Q9Y6Q5 423 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 FRYLO94915 3013 aa10.04□□□□□ -0.8
USP13-205ENST00000497380 ASCC3Q8N3C0 2202 aaKnown RBP10.04□□□□□ -0.8
USP13-205ENST00000497380 IGHV5-51A0A0C4DH38 117 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 IGHV5-10-1A0A0J9YXX1 117 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 A8MU76 341 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 MANBAO00462 879 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 FFAR3O14843 346 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 HAT1O14929 419 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 GPR42O15529 346 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 ZSCAN9O15535 394 aaPredicted RBP10.03□□□□□ -0.8
USP13-205ENST00000497380 KIF1CO43896 1103 aaKnown RBP10.03□□□□□ -0.8
USP13-205ENST00000497380 PRAMEF4O60810 478 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 SHOX2O60902 331 aaPredicted RBP10.03□□□□□ -0.8
USP13-205ENST00000497380 CLEC3AO75596 197 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 THRAP10827 490 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 PVRP15151 417 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 PCSK2P16519 638 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 NELFEP18615 380 aaKnown RBP10.03□□□□□ -0.8
USP13-205ENST00000497380 CD22P20273 847 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 PTX3P26022 381 aaPredicted RBP10.03□□□□□ -0.8
USP13-205ENST00000497380 ARRB2P32121 409 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 CSF2RBP32927 897 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 CSTF2P33240 577 aaKnown RBP eCLIP10.03□□□□□ -0.8
USP13-205ENST00000497380 LSSP48449 732 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 INHBCP55103 352 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 YBX1P67809 324 aaKnown RBP10.03□□□□□ -0.8
USP13-205ENST00000497380 MEF2AQ02078 507 aaPredicted RBP10.03□□□□□ -0.8
USP13-205ENST00000497380 ACY1Q03154 408 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 CFHR1Q03591 330 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 RGS1Q08116 209 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 TGM3Q08188 693 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 PWP1Q13610 501 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 TCTE1Q5JU00 501 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 SNAP47Q5SQN1 464 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 PHF19Q5T6S3 580 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 PRAMEF9Q5VWM5 478 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 CLEC6AQ6EIG7 209 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 FBXO42Q6P3S6 717 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 RNF44Q7L0R7 432 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 ARHGAP22Q7Z5H3 698 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 BPHLQ86WA6 291 aaPredicted RBP10.03□□□□□ -0.8
USP13-205ENST00000497380 FAM20CQ8IXL6 584 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 PARP9Q8IXQ6 854 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 D2HGDHQ8N465 521 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 SRFBP1Q8NEF9 429 aaKnown RBP10.03□□□□□ -0.8
USP13-205ENST00000497380 DEFB124Q8NES8 71 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 OR8K5Q8NH50 307 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 TWIST2Q8WVJ9 160 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 STON2Q8WXE9 905 aa10.03□□□□□ -0.8
USP13-205ENST00000497380 CMTM7Q96FZ5 175 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms