RNA–Protein interactions for RNA: ENST00000496055.5

RABGGTB-213, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 2

Gene RABGGTB, Length 3,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-213ENST00000496055 EFEMP2O95967 443 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SHBGP04278 402 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 TPOP07202 933 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SMIM6P0DI80 62 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 MBL2P11226 248 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 TCF4P15884 667 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 FOXN2P32314 431 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CRATP43155 626 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 PREPP48147 710 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CCT3P49368 545 aaKnown RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 EIF3BP55884 814 aaKnown RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 LILRA4P59901 499 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CDR2Q01850 454 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 TRAF2Q12933 501 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 MED21Q13503 144 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 PNLIPRP3Q17RR3 467 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SLC10A6Q3KNW5 377 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 KHDC1Q4VXA5 237 aaKnown RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ACTBL2Q562R1 376 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 BEX5Q5H9J7 111 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ATXN7L2Q5T6C5 722 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 PMF1Q6P1K2 205 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 BRAT1Q6PJG6 821 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 MAML2Q8IZL2 1156 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SLC35F6Q8N357 371 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 TOP6BLQ8N6T0 577 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SYT14Q8NB59 555 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 POGLUT1Q8NBL1 392 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 TMEM161BQ8NDZ6 487 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 OR2L3Q8NG85 312 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 OR13C2Q8NGS9 318 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 TRUB1Q8WWH5 349 aaKnown RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 C18orf8Q96DM3 657 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 DMRTA2Q96SC8 542 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 RUSC1Q9BVN2 902 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SLC6A16Q9GZN6 736 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 COPS7BQ9H9Q2 264 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ZMAT3Q9HA38 289 aaKnown RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 GJB4Q9NTQ9 266 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 RBAKQ9NYW8 714 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ABCD2Q9UBJ2 740 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 STAP1Q9ULZ2 295 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CDC14AQ9UNH5 594 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 TESMINQ9Y4I5 508 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 HACD1B0YJ81 288 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ITGB1BP1O14713 200 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ADAMTS3O15072 1205 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CNTN5O94779 1100 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SEC24AO95486 1093 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 LDOC1O95751 146 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CYBBP04839 570 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 H2AFB2P0C5Z0 115 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CD40LGP29965 261 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CDKN2CP42773 168 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SUCLG1P53597 346 aaKnown RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SELENOVP59797 346 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ERVK-25P63136 954 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 BTKQ06187 659 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 EGR3Q06889 387 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 BTN1A1Q13410 526 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 PPP1R3AQ16821 1122 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SLC36A3Q495N2 470 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 RUNDC3AQ59EK9 446 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 INTS6LQ5JSJ4 861 aaKnown RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ZNF468Q5VIY5 522 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 IRAK1BP1Q5VVH5 260 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SEL1L3Q68CR1 1132 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 EMBQ6PCB8 327 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 C11orf57Q6ZUT1 292 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 NDUFAF7Q7L592 441 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 TUSC5Q8IXB3 177 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CENPLQ8N0S6 344 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 FAM169BQ8N8A8 192 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 FAM156AQ8NDB6 213 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 OR9A2Q8NGT5 310 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 LKAAEAR1Q8TD35 194 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ST8SIA4Q92187 359 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 PIGKQ92643 395 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CAVIN3Q969G5 261 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 BSCL2Q96G97 398 aaPredicted RBP4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 RILPQ96NA2 401 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CNTNAP3BQ96NU0 1288 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 SERPINB11Q96P15 392 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 PFDN5Q99471 154 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 DHRS4Q9BTZ2 278 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ERVK-6Q9BXR3 956 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CNTNAP3Q9BZ76 1288 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 DERL2Q9GZP9 239 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 OPA3Q9H6K4 179 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 CATSPERBQ9H7T0 1116 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 IMPAD1Q9NX62 359 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ERVK-18Q9QC07 812 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 PISDQ9UG56 409 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 RWDD2AQ9UIY3 292 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 METTL21EPA6NDL7 271 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 ANKDD1BA6NHY2 528 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 OR2AT4A6NND4 320 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 WASHC1A8K0Z3 465 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 WASH3PC4AMC7 463 aa4.43□□□□□ -1.7
RABGGTB-213ENST00000496055 GPR39O43194 453 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms