RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CEACAM4O75871 244 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 SLC26A3P40879 764 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 CASRP41180 1078 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 BCL6P41182 706 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 SKP1P63208 163 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 KLC1Q07866 573 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 AIMP2Q13155 320 aaKnown RBP16.77■□□□□ 0.28
HDAC4-211ENST00000494800 TGFBIQ15582 683 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 ZKSCAN8Q15776 578 aaPredicted RBP16.77■□□□□ 0.28
HDAC4-211ENST00000494800 CDKL4Q5MAI5 379 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 CCDC91Q7Z6B0 441 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 GPSM1Q86YR5 675 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 DTWD1Q8N5C7 304 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 MFSD9Q8NBP5 474 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 NOA1Q8NC60 698 aaKnown RBP16.77■□□□□ 0.28
HDAC4-211ENST00000494800 FDCSPQ8NFU4 85 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 OR4K1Q8NGD4 311 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 NEIL2Q969S2 332 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 TSNARE1Q96NA8 513 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 OR4K3Q96R72 315 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 AIF1LQ9BQI0 150 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 CAPS2Q9BXY5 557 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 SYNPO2LQ9H987 977 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 PELI2Q9HAT8 420 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 ANKHQ9HCJ1 492 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 C3orf18Q9UK00 162 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 SLC22A14Q9Y267 594 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 CFAP46Q8IYW2 2715 aa16.77■□□□□ 0.28
HDAC4-211ENST00000494800 COL6A6A6NMZ7 2263 aa16.77■□□□□ 0.27
HDAC4-211ENST00000494800 IGLV3-12A0A075B6K2 115 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 NCF1BA6NI72 391 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 NCF1CA8MVU1 366 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 PCDH17O14917 1159 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 DPM1O60762 260 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 IPO13O94829 963 aaKnown RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 WDR47O94967 919 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 WISP3O95389 354 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 NSA2O95478 260 aaKnown RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 C1QAP02745 245 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 NCF1P14598 390 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 GNAZP19086 355 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 NR1D1P20393 614 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 CXCR2P25025 360 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 FOXL2P58012 376 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 RGS1Q08116 209 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 PWP1Q13610 501 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 UAP1Q16222 522 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 ZXDCQ2QGD7 858 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 TUBB8Q3ZCM7 444 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 TMEM214Q6NUQ4 689 aaKnown RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 NIPAL1Q6NVV3 410 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 VN1R4Q7Z5H5 301 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 RELL1Q8IUW5 271 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 PRSS58Q8IYP2 241 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 GALNT16Q8N428 558 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 SPATA6LQ8N4H0 392 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 TM4SF19Q96DZ7 209 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 SARGQ9BW04 601 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 TGIF2Q9GZN2 237 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 NMRAL1Q9HBL8 299 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 MLXIPLQ9NP71 852 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 WWOXQ9NZC7 414 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 DMGDHQ9UI17 866 aaKnown RBP16.76■□□□□ 0.27
HDAC4-211ENST00000494800 FBXL4Q9UKA2 621 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 RNF112Q9ULX5 631 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 IKBKGQ9Y6K9 419 aa16.76■□□□□ 0.27
HDAC4-211ENST00000494800 PCM1Q15154 2024 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 MAP2K7O14733 419 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 NDUFS4O43181 175 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 FOXS1O43638 330 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 H2AFYO75367 372 aaKnown RBP16.75■□□□□ 0.27
HDAC4-211ENST00000494800 FAM155BO75949 473 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 STATHP02808 62 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 SERPIND1P05546 499 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 HEXBP07686 556 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 ACPPP15309 386 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 CD1DP15813 335 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 EMP2P54851 167 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 MEF2AQ02078 507 aaPredicted RBP16.75■□□□□ 0.27
HDAC4-211ENST00000494800 HERC3Q15034 1050 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 VWA2Q5GFL6 755 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 CATSPEREQ5SY80 951 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 VWA5B1Q5TIE3 1220 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 SULT1C3Q6IMI6 304 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 NXPE4Q6UWF7 544 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 TMPRSS11BQ86T26 416 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 ARHGEF39Q8N4T4 335 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 OR9A4Q8NGU2 314 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 STAG3L4Q8TBR4 150 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 TM9SF4Q92544 642 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 KIAA1191Q96A73 305 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 RHBDF1Q96CC6 855 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 UBXN10Q96LJ8 280 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 UNKQ9C0B0 810 aaKnown RBP16.75■□□□□ 0.27
HDAC4-211ENST00000494800 CD274Q9NZQ7 290 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 C5AR2Q9P296 337 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 HS3ST3B1Q9Y662 390 aa16.75■□□□□ 0.27
HDAC4-211ENST00000494800 A0A087X1B8 175 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 URADA6NGE7 173 aa16.74■□□□□ 0.27
HDAC4-211ENST00000494800 K7EM74 188 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms