RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 HPP00738 406 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 HEXBP07686 556 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 GRK3P35626 688 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 BCL6P41182 706 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 AVPR1BP47901 424 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 MAT1AQ00266 395 aaKnown RBP14.8□□□□□ -0.04
LIMS2-216ENST00000494613 SRSF1Q07955 248 aaKnown RBP eCLIP14.8□□□□□ -0.04
LIMS2-216ENST00000494613 C2orf54Q08AI8 447 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 CALCOCO2Q13137 446 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 AGAP7PQ5VUJ5 663 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 FAAH2Q6GMR7 532 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 SBSNQ6UWP8 590 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 CAPN12Q6ZSI9 719 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 C3orf62Q6ZUJ4 267 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 CYS1Q717R9 158 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 NDUFAF7Q7L592 441 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 CEP97Q8IW35 865 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 SHISA5Q8N114 240 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 KCT2Q8NC54 265 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 CAMKVQ8NCB2 501 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 GALNT11Q8NCW6 608 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 SLC13A3Q8WWT9 602 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 ATL1Q8WXF7 558 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 ANKRD7Q92527 254 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 C19orf60Q96EN9 201 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 AGAP4Q96P64 663 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 ZNF160Q9HCG1 818 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 SAYSD1Q9NPB0 183 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 NSMCE4AQ9NXX6 385 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 GRHL1Q9NZI5 618 aa14.8□□□□□ -0.04
LIMS2-216ENST00000494613 NOVA2Q9UNW9 492 aaKnown RBP14.8□□□□□ -0.04
LIMS2-216ENST00000494613 MTO1Q9Y2Z2 717 aaKnown RBP14.8□□□□□ -0.04
LIMS2-216ENST00000494613 SETXQ7Z333 2677 aaKnown RBP14.8□□□□□ -0.04
LIMS2-216ENST00000494613 CLEC18AA5D8T8 446 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 H0YIG0 161 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 EIF3HO15372 352 aaKnown RBP eCLIP14.79□□□□□ -0.04
LIMS2-216ENST00000494613 BMP10O95393 424 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 ENO2P09104 434 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-216ENST00000494613 ACPPP15309 386 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 CXCR2P25025 360 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 CCR8P51685 355 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 MEF2AQ02078 507 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-216ENST00000494613 CSHL1Q14406 222 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 ZNF460Q14592 562 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 TRADDQ15628 312 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 PRR30Q53SZ7 412 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-216ENST00000494613 CRB2Q5IJ48 1285 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 CATSPEREQ5SY80 951 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 TMEM214Q6NUQ4 689 aaKnown RBP14.79□□□□□ -0.04
LIMS2-216ENST00000494613 IGFL2Q6UWQ7 119 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 CLEC18BQ6UXF7 455 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 PRSS41Q7RTY9 318 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 CISD2Q8N5K1 135 aaKnown RBP14.79□□□□□ -0.04
LIMS2-216ENST00000494613 MFSD9Q8NBP5 474 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 CLEC18CQ8NCF0 446 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 ANKRD49Q8WVL7 239 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 TM9SF4Q92544 642 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 SNRNP40Q96DI7 357 aaKnown RBP14.79□□□□□ -0.04
LIMS2-216ENST00000494613 SARGQ9BW04 601 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 FAM129AQ9BZQ8 928 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 RHOJQ9H4E5 214 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 MKL2Q9ULH7 1088 aa14.79□□□□□ -0.04
LIMS2-216ENST00000494613 UTP11Q9Y3A2 253 aaKnown RBP14.79□□□□□ -0.04
LIMS2-216ENST00000494613 FLNCQ14315 2725 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 NSG1A0A0A6YYJ2 146 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 MAP2K7O14733 419 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 OR1F1O43749 312 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 JRKO75564 520 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 KLHL18O94889 574 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 NSA2O95478 260 aaKnown RBP14.78□□□□□ -0.04
LIMS2-216ENST00000494613 ZNF37AP17032 561 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-216ENST00000494613 GNLYP22749 145 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 VARSP26640 1264 aaKnown RBP14.78□□□□□ -0.04
LIMS2-216ENST00000494613 PLTPP55058 493 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 PPP1R3AQ16821 1122 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 IRAK1BP1Q5VVH5 260 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 TMEM205Q6UW68 189 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 Q6ZS92 163 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 ASPGQ86U10 573 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 ZC3H7AQ8IWR0 971 aaKnown RBP14.78□□□□□ -0.04
LIMS2-216ENST00000494613 AMER2Q8N7J2 671 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 ZNF740Q8NDX6 193 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 OR51Q1Q8NH59 317 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 DNAJB14Q8TBM8 379 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 NEIL2Q969S2 332 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 MOCOSQ96EN8 888 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 VPS39Q96JC1 886 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 LMF1Q96S06 567 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 CYTH2Q99418 400 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 C14orf105Q9NVL8 296 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 MAP10Q9P2G4 905 aa14.78□□□□□ -0.04
LIMS2-216ENST00000494613 PRRC2CQ9Y520 2896 aaKnown RBP14.77□□□□□ -0.04
LIMS2-216ENST00000494613 TRBC2A0A5B9 178 aa14.77□□□□□ -0.05
LIMS2-216ENST00000494613 OR2W5A6NFC9 320 aa14.77□□□□□ -0.05
LIMS2-216ENST00000494613 TCP11X1B4DZS4 312 aa14.77□□□□□ -0.05
LIMS2-216ENST00000494613 SGK494L7N484 410 aa14.77□□□□□ -0.05
LIMS2-216ENST00000494613 COX6A1P12074 109 aa14.77□□□□□ -0.05
LIMS2-216ENST00000494613 IL1RNP18510 177 aa14.77□□□□□ -0.05
LIMS2-216ENST00000494613 UQCRFS1P47985 274 aa14.77□□□□□ -0.05
LIMS2-216ENST00000494613 GLRBP48167 497 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms