RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.92□□□□□ -1.78
ATG3-207ENST00000494571 STK35Q8TDR2 534 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 TSPEARQ8WU66 669 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 GCDHQ92947 438 aaPredicted RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 CHFRQ96EP1 664 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 C14orf144Q96I85 54 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ZC3H10Q96K80 434 aaKnown RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 SIGLEC10Q96LC7 697 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ZFP42Q96MM3 310 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 TMEM74Q96NL1 305 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 AMDHD1Q96NU7 426 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 CAMK1GQ96NX5 476 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 COL21A1Q96P44 957 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 GPR78Q96P69 363 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 SORCS2Q96PQ0 1159 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 MBOAT4Q96T53 435 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 BARD1Q99728 777 aaKnown RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 OMDQ99983 421 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 P2RY13Q9BPV8 354 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 TMEM175Q9BSA9 504 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 PI4K2AQ9BTU6 479 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 FICDQ9BVA6 458 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 REG4Q9BYZ8 158 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 PRO1933Q9H354 126 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 MUC13Q9H3R2 512 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 TASP1Q9H6P5 420 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 EVA1AQ9H8M9 152 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 POPDC2Q9HBU9 364 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 FBRSL1Q9HCM7 1045 aaKnown RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 ZNF334Q9HCZ1 680 aaPredicted RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 KRT84Q9NSB2 600 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 NSMCE4AQ9NXX6 385 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 HECAQ9UBI9 543 aaPredicted RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 TJP2Q9UDY2 1190 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 FAM198AQ9UFP1 575 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 GIMAP2Q9UG22 337 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 CDH9Q9ULB4 789 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ZMIZ1Q9ULJ6 1067 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 GABRQQ9UN88 632 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 CRYL1Q9Y2S2 319 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 RAP2CQ9Y3L5 183 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ZNF451Q9Y4E5 1061 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 PCDHB14Q9Y5E9 798 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ORC6Q9Y5N6 252 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 IRAK3Q9Y616 596 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 SRCAPQ6ZRS2 3230 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 SLIT3O75094 1523 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 MYH9P35579 1960 aaKnown RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 CCDC88AQ3V6T2 1871 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 FLT4P35916 1363 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 hCG_1818297A0A087WSY0 165 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 OR6C68A6NDL8 312 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ISM1B1AKI9 464 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 DISC1C4P0D8 188 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 USP17L12C9JPN9 530 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 USP17L21D6R901 530 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 GTPBP1O00178 669 aaKnown RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 SULT1C2O00338 296 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 TBX3O15119 743 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 CD3EAPO15446 510 aaKnown RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 TGFB1I1O43294 461 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 OR10H2O60403 315 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 TULP3O75386 442 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 AKR7A3O95154 331 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 PRAMEF1O95521 474 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 MT-CYBP00156 380 aaPredicted RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 S100A8P05109 93 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 CSF3P09919 207 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 SUPT20HL2P0C7V6 817 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 PDGFRAP16234 1089 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 YWHAQP27348 245 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 PPM1AP35813 382 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 AVPR1AP37288 418 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 SPAM1P38567 509 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 MMP12P39900 470 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 CDK8P49336 464 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 CCR9P51686 369 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 NUDT6P53370 316 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 CRISP3P54108 245 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 SESN2P58004 480 aaPredicted RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 ISL1P61371 349 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 DYNLL1P63167 89 aaKnown RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 FABP9Q0Z7S8 132 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 LRRC32Q14392 662 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ZSWIM7Q19AV6 140 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 MICAQ29983 383 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 TFDP3Q5H9I0 405 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 LCN1P1Q5VSP4 162 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ZNF470Q6ECI4 717 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 DNAJC24Q6P3W2 148 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ZNF613Q6PF04 617 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 UNQ6494/PRO21346Q6UXR6 183 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 ZNF574Q6ZN55 896 aaPredicted RBP3.92□□□□□ -1.78
ATG3-207ENST00000494571 FAM196AQ6ZSG2 479 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 USP30Q70CQ3 517 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 NAA40Q86UY6 237 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 SIAH1Q8IUQ4 282 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 MAP4K3Q8IVH8 894 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 DCUN1D3Q8IWE4 304 aa3.92□□□□□ -1.78
ATG3-207ENST00000494571 RBFAQ8N0V3 343 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms