RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-211	ENST00000493957	KERA	O60938	352 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	KRT38	O76015	456 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	KLK3	P07288	261 aa	Predicted RBP	11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	SNRPA	P09012	282 aa	Known RBP	11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	EPOR	P19235	508 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	ALAS2	P22557	587 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	HSD17B3	P37058	310 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	SLC26A3	P40879	764 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	SLCO1A2	P46721	670 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	OR1D4	P47884	311 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	HNMT	P50135	292 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	CDC20	Q12834	499 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	GRM7	Q14831	915 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	TECRL	Q5HYJ1	363 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	TCTE1	Q5JU00	501 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	SULT1C3	Q6IMI6	304 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	C16orf46	Q6P387	395 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	PCSK4	Q6UW60	755 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	TAOK1	Q7L7X3	1001 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	PRSS41	Q7RTY9	318 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	CYP4X1	Q8N118	509 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	TTC29	Q8NA56	475 aa	Predicted RBP	11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	ABHD11	Q8NFV4	315 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	OR4K1	Q8NGD4	311 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	OR2W6P	Q8NHA6	318 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	STAG3L4	Q8TBR4	150 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	EPS8L3	Q8TE67	593 aa	Known RBP	11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	AEN	Q8WTP8	325 aa	Known RBP	11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	MOCOS	Q96EN8	888 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	ENAM	Q9NRM1	1142 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	NUDT4	Q9NZJ9	180 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	SRPK3	Q9UPE1	567 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	DYRK1B	Q9Y463	629 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957	MAU2	Q9Y6X3	613 aa		11.11	□□□□□ -0.63
UBA3-211	ENST00000493957		A0A1B0GX78	115 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957		A0A1W2PPM1	405 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	ZNF891	A8MT65	544 aa	Predicted RBP	11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	C21orf140	B9A014	251 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	RNF223	E7ERA6	249 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	GOLGA8R	I6L899	631 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	CCNT2	O60583	730 aa	Known RBP	11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	CREG1	O75629	220 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	S100B	P04271	92 aa	Predicted RBP	11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	HBQ1	P09105	142 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	CNTF	P26441	200 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	PTPN4	P29074	926 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	GGT5	P36269	586 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	CCR8	P51685	355 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	RPS15A	P62244	130 aa	Known RBP	11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	REEP5	Q00765	189 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	ERV3-1	Q14264	604 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	NCF4	Q15080	339 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	FAM83E	Q2M2I3	478 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	NKAIN1	Q4KMZ8	207 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	MLIP	Q5VWP3	458 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	FAM219B	Q5XKK7	198 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	ADNP2	Q6IQ32	1131 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	WDR93	Q6P2C0	686 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	NXPE4	Q6UWF7	544 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	SLCO4C1	Q6ZQN7	724 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	SNX31	Q8N9S9	440 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	MFSD9	Q8NBP5	474 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	PROKR1	Q8TCW9	393 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	TTC9	Q92623	222 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	EXTL1	Q92935	676 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	RERG	Q96A58	199 aa	Predicted RBP	11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	CABS1	Q96KC9	395 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	BBC3	Q96PG8	261 aa	Predicted RBP	11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	PARD6B	Q9BYG5	372 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	DNAJC11	Q9NVH1	559 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	CPSF2	Q9P2I0	782 aa	Known RBP	11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	FARSA	Q9Y285	508 aa	Known RBP	11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	PCDHGA6	Q9Y5G7	932 aa		11.1	□□□□□ -0.63
UBA3-211	ENST00000493957	TRBC2	A0A5B9	178 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	CDC14C	A4D256	554 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	MAP2K7	O14733	419 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	FOXS1	O43638	330 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	OR1F1	O43749	312 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	STK16	O75716	305 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	B3GALT4	O96024	378 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	SBK3	P0C264	359 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	CD22	P20273	847 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	AGXT	P21549	392 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	HRH2	P25021	359 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	ARSF	P54793	590 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	DCD	P81605	110 aa	Known RBP	11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	RELA	Q04206	551 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	CDC16	Q13042	620 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	ACAP2	Q15057	778 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	PFKFB4	Q16877	469 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	SYT16	Q17RD7	645 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	LINC00303	Q3SY05	128 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	CDKL4	Q5MAI5	379 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	MRPL14	Q6P1L8	145 aa	Known RBP	11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	TIFAB	Q6ZNK6	161 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	SHISA6	Q6ZSJ9	500 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	CCDC91	Q7Z6B0	441 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	TCAIM	Q8N3R3	496 aa		11.09	□□□□□ -0.63
UBA3-211	ENST00000493957	ANKRD53	Q8N9V6	530 aa		11.09	□□□□□ -0.63

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