RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 KIF1CO43896 1103 aaKnown RBP14.29□□□□□ -0.12
ACTB-213ENST00000493945 ULK1O75385 1050 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 VARSP26640 1264 aaKnown RBP14.29□□□□□ -0.12
ACTB-213ENST00000493945 TSPAN7P41732 249 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 PIK3CBP42338 1070 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 SCTRP47872 440 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 ITGA1P56199 1179 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 FOXM1Q08050 763 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 CYP4F3Q08477 520 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 BST1Q10588 318 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 PWP1Q13610 501 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 GRM7Q14831 915 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 SH2D4BQ5SQS7 431 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 FRG2Q64ET8 278 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 CEACAM20Q6UY09 585 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 ZNF574Q6ZN55 896 aaPredicted RBP14.29□□□□□ -0.12
ACTB-213ENST00000493945 RGS9BPQ6ZS82 235 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 RAB11FIP2Q7L804 512 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 ASPGQ86U10 573 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 SLCO6A1Q86UG4 719 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 PPP1R3BQ86XI6 285 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 LAS2Q8IYD9 372 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 CLYBLQ8N0X4 340 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 CDYL2Q8N8U2 506 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 RCBTB1Q8NDN9 531 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 SELENOMQ8WWX9 145 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 ZNF75CPQ92670 426 aaPredicted RBP14.29□□□□□ -0.12
ACTB-213ENST00000493945 FCRL4Q96PJ5 515 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 FRG2BQ96QU4 278 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 NRTNQ99748 197 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 ASPSCR1Q9BZE9 553 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 KLHL25Q9H0H3 589 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 FGF21Q9NSA1 209 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 LOXL2Q9Y4K0 774 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 PCDHGA4Q9Y5G9 962 aa14.29□□□□□ -0.12
ACTB-213ENST00000493945 IGKV1-8A0A0C4DH67 115 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 EFCAB7A8K855 629 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 TMEM150CB9EJG8 249 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 POLR1CO15160 346 aaPredicted RBP14.28□□□□□ -0.12
ACTB-213ENST00000493945 CLEC3AO75596 197 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 OR4F21O95013 312 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 SERPIND1P05546 499 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 CAPN1P07384 714 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 MDH1P40925 334 aaKnown RBP14.28□□□□□ -0.12
ACTB-213ENST00000493945 ARSFP54793 590 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 ZRSR2Q15696 482 aaKnown RBP14.28□□□□□ -0.12
ACTB-213ENST00000493945 IMPG1Q17R60 797 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 FAM214AQ32MH5 1076 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 FCRL6Q6DN72 434 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 CHSY3Q70JA7 882 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 ABHD13Q7L211 337 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 MCATQ8IVS2 390 aaKnown RBP14.28□□□□□ -0.12
ACTB-213ENST00000493945 WDR75Q8IWA0 830 aaKnown RBP14.28□□□□□ -0.12
ACTB-213ENST00000493945 FAM20CQ8IXL6 584 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 GBP7Q8N8V2 638 aaPredicted RBP14.28□□□□□ -0.12
ACTB-213ENST00000493945 SLC13A3Q8WWT9 602 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 CMTM7Q96FZ5 175 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 C7orf26Q96N11 449 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 ROGDIQ9GZN7 287 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 NSRP1Q9H0G5 558 aaKnown RBP14.28□□□□□ -0.12
ACTB-213ENST00000493945 BRF2Q9HAW0 419 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 AHSPQ9NZD4 102 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 VTI1BQ9UEU0 232 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 PPT2Q9UMR5 302 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 SH2B3Q9UQQ2 575 aa14.28□□□□□ -0.12
ACTB-213ENST00000493945 DCDC2BA2VCK2 349 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 TRPC5OSA6NMA1 111 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 PLD2O14939 933 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 NDUFS4O43181 175 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 OR2B3O76000 313 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 FGF4P08620 206 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 TSPAN8P19075 237 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 EPORP19235 508 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 ID4P47928 161 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 LSSP48449 732 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 RPL14P50914 215 aaKnown RBP14.27□□□□□ -0.13
ACTB-213ENST00000493945 EMP3P54852 163 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 MEF2AQ02078 507 aaPredicted RBP14.27□□□□□ -0.13
ACTB-213ENST00000493945 CSTF3Q12996 717 aaKnown RBP14.27□□□□□ -0.13
ACTB-213ENST00000493945 DDX39BQ13838 428 aaKnown RBP14.27□□□□□ -0.13
ACTB-213ENST00000493945 DCAF12Q5T6F0 453 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 GARNL3Q5VVW2 1013 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 LETMD1Q6P1Q0 360 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 TMPRSS7Q7RTY8 843 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 B3GNT8Q7Z7M8 397 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 SYVN1Q86TM6 617 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.27□□□□□ -0.134e-7■■■□□ 16.6
ACTB-213ENST00000493945 LSMEM2Q8N112 164 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 DNAJC22Q8N4W6 341 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 CSNK1A1LQ8N752 337 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 OR7G3Q8NG95 312 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 OR6Y1Q8NGX8 325 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 PPM1MQ96MI6 270 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 CDK15Q96Q40 435 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 OR6C1Q96RD1 312 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 SERPINI1Q99574 410 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 SIKE1Q9BRV8 207 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 NDC1Q9BTX1 674 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 B3GNT4Q9C0J1 378 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 RHBGQ9H310 441 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms