RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	GSC	P56915	257 aa	Predicted RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	MAT1A	Q00266	395 aa	Known RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	ACTN3	Q08043	901 aa	Predicted RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	FOXO1	Q12778	655 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	MAMLD1	Q13495	774 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	BOP1	Q14137	746 aa	Known RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	KIR2DS3	Q14952	304 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	FAM120AOS	Q5T036	256 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	CDKAL1	Q5VV42	579 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	VASN	Q6EMK4	673 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	ALG1L	Q6GMV1	187 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	FRMPD2B	Q6IN97	320 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	PAPD4	Q6PIY7	484 aa	Known RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	FAM151B	Q6UXP7	276 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	RGS9BP	Q6ZS82	235 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	KIAA0408	Q6ZU52	694 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	BZW1	Q7L1Q6	419 aa	Known RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	LUZP2	Q86TE4	346 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	SLC22A16	Q86VW1	577 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	ZC3H7A	Q8IWR0	971 aa	Known RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	CYP4Z2P	Q8N1L4	340 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	KIF2B	Q8N4N8	673 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	AMER3	Q8N944	861 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	KCTD6	Q8NC69	237 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	OR5AR1	Q8NGP9	310 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	HM13	Q8TCT9	377 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	GCDH	Q92947	438 aa	Predicted RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	LRRC45	Q96CN5	670 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	TRMT61A	Q96FX7	289 aa	Known RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	LINC00615	Q96LM1	132 aa	Predicted RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	C10orf90	Q96M02	699 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	HS3ST6	Q96QI5	342 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	SRPK1	Q96SB4	655 aa	Known RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	ANGPTL4	Q9BY76	406 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	TTTY12	Q9BZ98	90 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	VN1R1	Q9GZP7	353 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	OR52A5	Q9H2C5	316 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	COG4	Q9H9E3	785 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	MAGEE1	Q9HCI5	957 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	IL26	Q9NPH9	171 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	ENAM	Q9NRM1	1142 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	LMBRD1	Q9NUN5	540 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	INTS7	Q9NVH2	962 aa	Known RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	KLHL28	Q9NXS3	571 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	GALNT8	Q9NY28	637 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	ZNF226	Q9NYT6	803 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5	□□□□□ -1.61	4e-32	■■■■□ 25.9
SEC13-219	ENST00000492602	CWC15	Q9P013	229 aa	Known RBP	5	□□□□□ -1.61
SEC13-219	ENST00000492602	IP6K2	Q9UHH9	426 aa		5	□□□□□ -1.61
SEC13-219	ENST00000492602	LOC105369274	A0A096LPK9	316 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	LOC102723532	A0A0G2JNH3	316 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	GLYATL1P3	A0A0U1RQE8	302 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ATP6AP2	A0A1C7CYW4	349 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	OR2W5	A6NFC9	320 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SOWAHD	A6NJG2	315 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	FCHO1	O14526	889 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	CBFA2T2	O43439	604 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	KIAA0513	O60268	411 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SUSD5	O60279	629 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	CTSV	O60911	334 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TMCC2	O75069	709 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ITGA10	O75578	1167 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ATP6AP2	O75787	350 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	EPPIN	O95925	133 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TUBB4A	P04350	444 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	HLA-DQB2	P05538	268 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	CELA3A	P09093	270 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TPBGL	P0DKB5	382 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	HNF1A	P20823	631 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	IL1R2	P27930	398 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	OPRM1	P35372	400 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	PCK1	P35558	622 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TIMP3	P35625	211 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	CYLC1	P35663	651 aa	Predicted RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SLC26A3	P40879	764 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	MC3R	P41968	323 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	CD151	P48509	253 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	AGTR2	P50052	363 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ADAR	P55265	1226 aa	Known RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	UBASH3A	P57075	661 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	MLF1	P58340	268 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	RPS4X	P62701	263 aa	Known RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	VLDLR	P98155	873 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TYRO3	Q06418	890 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ITGA9	Q13797	1035 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	DPYS	Q14117	519 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SLC10A1	Q14973	349 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SF1	Q15637	639 aa	Known RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	BCL7A	Q4VC05	210 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SFT2D3	Q587I9	215 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	CYB5R2	Q6BCY4	276 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ZNF449	Q6P9G9	518 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	MICALCL	Q6ZW33	695 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	APTX	Q7Z2E3	356 aa	Known RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ANKRD37	Q7Z713	158 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TAX1BP1	Q86VP1	789 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	CAND1	Q86VP6	1230 aa	Known RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	OR4N4	Q8N0Y3	316 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	FBXW8	Q8N3Y1	598 aa		4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms