RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 EFCAB7A8K855 629 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 NCF1CA8MVU1 366 aaPredicted RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 GPR89AB7ZAQ6 455 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 STMND1H3BQB6 276 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 STX16-NPEPL1H3BU86 382 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 GFYI3L273 518 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 STX16O14662 325 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 LIN7AO14910 233 aaPredicted RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SLC16A5O15375 505 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SIX3O95343 332 aaPredicted RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 MATN4O95460 622 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 HSPA4LO95757 839 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 C8GP07360 202 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 RPS17P08708 135 aaKnown RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 GPR89BP0CG08 455 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 TROVE2P10155 538 aaKnown RBP eCLIP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 F3P13726 295 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 NCF1P14598 390 aaPredicted RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 CD82P27701 267 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 PDHA2P29803 388 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SERPINB5P36952 375 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 AGTR2P50052 363 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 ALDH18A1P54886 795 aaKnown RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 HERVK_113P63132 956 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 HHEXQ03014 270 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SP140Q13342 867 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SETDB1Q15047 1291 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 TGFBIQ15582 683 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SYTL3Q4VX76 610 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 FBXO48Q5FWF7 155 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 ARL13AQ5H913 290 aaPredicted RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 CFAP157Q5JU67 520 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 FAM83HQ6ZRV2 1179 aaPredicted RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 FRMD7Q6ZUT3 714 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 FRA10AC1Q70Z53 315 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 UBE2R2Q712K3 238 aaPredicted RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 RPS27LQ71UM5 84 aaKnown RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 ARHGAP22Q7Z5H3 698 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SLC9B2Q86UD5 537 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 LRRTM4Q86VH4 590 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 FAM129CQ86XR2 697 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 CFAP206Q8IYR0 622 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SLC22A15Q8IZD6 547 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 CACNA2D3Q8IZS8 1091 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 ZSCAN1Q8NBB4 408 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 PDPRQ8NCN5 879 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 CCDC197Q8NCU1 140 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 OR2L2Q8NH16 312 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 OR10G6Q8NH81 332 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 RFWD2Q8NHY2 731 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 HM13Q8TCT9 377 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 PPP4R1Q8TF05 950 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 C10orf82Q8WW14 230 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 NKD1Q969G9 470 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SH3KBP1Q96B97 665 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 CNDP1Q96KN2 507 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 CTRCQ99895 268 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 DPYSL5Q9BPU6 564 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 TBC1D10AQ9BXI6 508 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 C1QTNF3Q9BXJ4 246 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SLC12A9Q9BXP2 914 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 ERVK-6Q9BXR3 956 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SOX17Q9H6I2 414 aaPredicted RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 PNPOQ9NVS9 261 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 UTP6Q9NYH9 597 aaKnown RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 CD274Q9NZQ7 290 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 KLHL14Q9P2G3 628 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 SLC23A2Q9UGH3 650 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 HAO1Q9UJM8 370 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 PTBP2Q9UKA9 531 aaKnown RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 PDE10AQ9Y233 779 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 RAP2CQ9Y3L5 183 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 PCDHGA3Q9Y5H0 932 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 B3GALT1Q9Y5Z6 326 aa7.3□□□□□ -1.24
CLDN1-202ENST00000490800 ARHGEF17Q96PE2 2063 aaPredicted RBP7.3□□□□□ -1.24
CLDN1-202ENST00000490800 OR5K4A6NMS3 321 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 B4E171 279 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.29□□□□□ -1.24
CLDN1-202ENST00000490800 PYCARD-AS1I3L0S3 204 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 J3QKU1 62 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 ZNF195O14628 629 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 KMOO15229 486 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 TAPBPO15533 448 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 DUX1O43812 170 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 PSIP1O75475 530 aaKnown RBP7.29□□□□□ -1.24
CLDN1-202ENST00000490800 SUPT7LO94864 414 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 S100BP04271 92 aaPredicted RBP7.29□□□□□ -1.24
CLDN1-202ENST00000490800 ITGB2P05107 769 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 ENO2P09104 434 aaPredicted RBP7.29□□□□□ -1.24
CLDN1-202ENST00000490800 KITP10721 976 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 HOXB4P17483 251 aaPredicted RBP7.29□□□□□ -1.24
CLDN1-202ENST00000490800 VCLP18206 1134 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 EEF1DP29692 281 aaKnown RBP7.29□□□□□ -1.24
CLDN1-202ENST00000490800 TSPAN7P41732 249 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 MAPK9P45984 424 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 CLCNKAP51800 687 aa7.29□□□□□ -1.24
CLDN1-202ENST00000490800 RPS26P62854 115 aaKnown RBP7.29□□□□□ -1.24
CLDN1-202ENST00000490800 SNRPNP63162 240 aaKnown RBP7.29□□□□□ -1.24
CLDN1-202ENST00000490800 CDKL1Q00532 357 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms