RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 HIST1H2AGP0C0S8 130 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-216ENST00000490796 PGAM1P18669 254 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 HIST1H2ADP20671 130 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 INAQ16352 499 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 CYP1B1Q16678 543 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 LRRC56Q8IYG6 542 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-216ENST00000490796 NAT8LQ8N9F0 302 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 HIST1H2AHQ96KK5 128 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 SIGLEC10Q96LC7 697 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 HIST1H2AJQ99878 128 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 H2AFJQ9BTM1 129 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 ANKHQ9HCJ1 492 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 ITPR2Q14571 2701 aa18.68■□□□□ 0.58
SREBF1-216ENST00000490796 A8MUI8 341 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 NSA2O95478 260 aaKnown RBP18.67■□□□□ 0.58
SREBF1-216ENST00000490796 CELA2AP08217 269 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 ITGAMP11215 1152 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 CCND1P24385 295 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 MAGEA3P43357 314 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 FNTAP49354 379 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 ZNF33BQ06732 778 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 PCOLCEQ15113 449 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 TMEM205Q6UW68 189 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 SPNS2Q8IVW8 549 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 OR51Q1Q8NH59 317 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 EEF1AKMT1Q8WVE0 214 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 NDNQ99608 321 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 SLX1AQ9BQ83 275 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 PARVBQ9HBI1 364 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 HCN3Q9P1Z3 774 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 ASIC3Q9UHC3 531 aa18.67■□□□□ 0.58
SREBF1-216ENST00000490796 KCNE1BA0A087WTH5 132 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 SEC24DO94855 1032 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-216ENST00000490796 TTC4O95801 387 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 WDPCPO95876 746 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 CYC1P08574 325 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 IL1RNP18510 177 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 XCR1P46094 333 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 SP140Q13342 867 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 NAE1Q13564 534 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 CRYMQ14894 314 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 HIBCHQ6NVY1 386 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-216ENST00000490796 AGTRAPQ6RW13 159 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 CPEB2Q7Z5Q1 589 aaKnown RBP18.66■□□□□ 0.58
SREBF1-216ENST00000490796 ASPGQ86U10 573 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 FJX1Q86VR8 437 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 ARHGEF39Q8N4T4 335 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 ZCCHC10Q8TBK6 192 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 FAM129AQ9BZQ8 928 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 VN1R1Q9GZP7 353 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 ATG10Q9H0Y0 220 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 STMN3Q9NZ72 180 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 PDE10AQ9Y233 779 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 NEU2Q9Y3R4 380 aa18.66■□□□□ 0.58
SREBF1-216ENST00000490796 FEZF1A0PJY2 475 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 SLC16A5O15375 505 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 RASAL1O95294 804 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 CRYABP02511 175 aaKnown RBP18.65■□□□□ 0.58
SREBF1-216ENST00000490796 SLC35G6P0C7Q6 338 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 BCL6P41182 706 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 CSNK1G2P78368 415 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 BTBD16Q32M84 506 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 GFRALQ6UXV0 394 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 VN1R4Q7Z5H5 301 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 TBC1D19Q8N5T2 526 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 C2CD4AQ8NCU7 369 aaPredicted RBP18.65■□□□□ 0.58
SREBF1-216ENST00000490796 SLC13A3Q8WWT9 602 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 NR4A3Q92570 626 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 LINGO1Q96FE5 620 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 CYTH2Q99418 400 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 MACROD1Q9BQ69 325 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 NAT9Q9BTE0 207 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 TRIM54Q9BYV2 358 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 RNF32Q9H0A6 362 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 PPANQ9NQ55 473 aaKnown RBP18.65■□□□□ 0.58
SREBF1-216ENST00000490796 ABI3Q9P2A4 366 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 ADAMTS6Q9UKP5 1117 aa18.65■□□□□ 0.58
SREBF1-216ENST00000490796 IGHV3-20A0A0C4DH32 117 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 OR5H15A6NDH6 313 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 SGK494L7N484 410 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 ZG16O60844 167 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 STSP08842 583 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 AGTR2P50052 363 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 KCNK10P57789 538 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 ACTN3Q08043 901 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-216ENST00000490796 PDAP1Q13442 181 aaKnown RBP18.64■□□□□ 0.57
SREBF1-216ENST00000490796 ZRSR2Q15696 482 aaKnown RBP18.64■□□□□ 0.57
SREBF1-216ENST00000490796 SPANXN3Q5MJ09 141 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 RNASEH2BQ5TBB1 312 aaKnown RBP18.64■□□□□ 0.57
SREBF1-216ENST00000490796 C1QL3Q5VWW1 255 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 CAPN13Q6MZZ7 669 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-216ENST00000490796 TMEM214Q6NUQ4 689 aaKnown RBP18.64■□□□□ 0.57
SREBF1-216ENST00000490796 PAQR3Q6TCH7 311 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 MBOAT1Q6ZNC8 495 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 LANCL3Q6ZV70 420 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 PRSS41Q7RTY9 318 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 PCGF5Q86SE9 256 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 AGGF1Q8N302 714 aaeCLIP18.64■□□□□ 0.57
SREBF1-216ENST00000490796 ACTRT1Q8TDG2 376 aa18.64■□□□□ 0.57
SREBF1-216ENST00000490796 IMMP1LQ96LU5 166 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms