RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 CDC25CP30307 473 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 ELAVL2Q12926 359 aaKnown RBP4.27□□□□□ -1.73
CCDC39-206ENST00000489868 FAM189A2Q15884 450 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 ENPP7Q6UWV6 458 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 GDPGP1Q6ZNW5 385 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 CCAR2Q8N163 923 aaKnown RBP4.27□□□□□ -1.73
CCDC39-206ENST00000489868 ATP8B4Q8TF62 1192 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 SEPT1Q8WYJ6 367 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 NSMAFQ92636 917 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 P2RX5Q93086 422 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 RBM41Q96IZ5 413 aaKnown RBP4.27□□□□□ -1.73
CCDC39-206ENST00000489868 CNDP2Q96KP4 475 aaKnown RBP4.27□□□□□ -1.73
CCDC39-206ENST00000489868 AGAP4Q96P64 663 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 NEDD4LQ96PU5 975 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 BTBD9Q96Q07 612 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 GPATCH1Q9BRR8 931 aaKnown RBP4.27□□□□□ -1.73
CCDC39-206ENST00000489868 GTPBP2Q9BX10 602 aaKnown RBP4.27□□□□□ -1.73
CCDC39-206ENST00000489868 RPS10P5Q9NQ39 176 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 NDE1Q9NXR1 346 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-206ENST00000489868 THAP10Q9P2Z0 257 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-206ENST00000489868 WIPI2Q9Y4P8 454 aa4.27□□□□□ -1.73
CCDC39-206ENST00000489868 SHISA7A6NL88 538 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 CCDC188H7C350 402 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 RTCAO00442 366 aaKnown RBP4.26□□□□□ -1.73
CCDC39-206ENST00000489868 STAG3L1P0CL83 205 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 CAPN2P17655 700 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 ZNF10P21506 573 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-206ENST00000489868 PTAFRP25105 342 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 PDHA2P29803 388 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 RGS7P49802 495 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 CACNG1Q06432 222 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 SGCGQ13326 291 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 C6orf136Q5SQH8 315 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 FAM166AQ6J272 317 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 C5orf24Q7Z6I8 188 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 PIGWQ7Z7B1 504 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 ABI3BPQ7Z7G0 1075 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 GBP7Q8N8V2 638 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-206ENST00000489868 KIF18AQ8NI77 898 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 TBC1D13Q9NVG8 400 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 TERF2IPQ9NYB0 399 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 MUTYHQ9UIF7 546 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 MOB4Q9Y3A3 225 aa4.26□□□□□ -1.73
CCDC39-206ENST00000489868 LOC105371242A0A075B767 164 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 H3BMM5 538 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 SAP30O75446 220 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 ACADSP16219 412 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 CRKLP46109 303 aaKnown RBP4.25□□□□□ -1.73
CCDC39-206ENST00000489868 NPY4RP50391 375 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 ZNF41P51814 821 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-206ENST00000489868 IRX6P78412 446 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-206ENST00000489868 COX10Q12887 443 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 MTHFSDQ2M296 383 aaKnown RBP4.25□□□□□ -1.73
CCDC39-206ENST00000489868 NOTUMQ6P988 496 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 MOXD1Q6UVY6 613 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 ERN2Q76MJ5 926 aaKnown RBP4.25□□□□□ -1.73
CCDC39-206ENST00000489868 NRARPQ7Z6K4 114 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 CCDC60Q8IWA6 550 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-206ENST00000489868 OR5T2Q8NGG2 359 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 OCC1Q8TAD7 63 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 C9orf43Q8TAL5 461 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-206ENST00000489868 ERP27Q96DN0 273 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 PGM2Q96G03 612 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 GDAP1L1Q96MZ0 367 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 DCTN5Q9BTE1 182 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 SNX25Q9H3E2 840 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 B3GAT2Q9NPZ5 323 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 PKD2L2Q9NZM6 624 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 HACD3Q9P035 362 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 PILRBQ9UKJ0 227 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 SELENOKQ9Y6D0 94 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 SMAD5-AS1Q9Y6J3 95 aa4.25□□□□□ -1.73
CCDC39-206ENST00000489868 TP53BP1Q12888 1972 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-206ENST00000489868 NEDD4P46934 1319 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 FAM86B1E9PN63 330 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 F8VVB4 439 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 F8VWA3 439 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 K7EQD1 137 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 FAM86B2P0C5J1 330 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 TLX1P31314 330 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-206ENST00000489868 SFTPDP35247 375 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 CETN2P41208 172 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 MFAP3P55082 362 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 PAX8Q06710 450 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 RBBP7Q16576 425 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 DUSP5Q16690 384 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 BTNL8Q6UX41 500 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 CCDC186Q7Z3E2 898 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 TCEANCQ8N8B7 351 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 OR4C15Q8NGM1 316 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 NXPE2Q96DL1 559 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 RADILQ96JH8 1075 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 CSAG2Q9Y5P2 127 aa4.24□□□□□ -1.73
CCDC39-206ENST00000489868 IL16Q14005 1332 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 A0A1W2PPW3 197 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 ANXA2P2A6NMY6 339 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 SURF4O15260 269 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 CYTIPO60759 359 aa4.23□□□□□ -1.73
CCDC39-206ENST00000489868 NXPH4O95158 308 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms