RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TRBV2A0A0J9YWF9 115 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 A0A0U1RQV5 110 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 A0A1W2PPQ1 181 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 DUXAA6NLW8 204 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 M0QX08 132 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 TLX2O43763 284 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 OR10H2O60403 315 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 TOM1O60784 492 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 ATP9AO75110 1047 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 TOM1L1O75674 476 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 NFATC1O95644 943 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 IL1BP01584 269 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 CXCL10P02778 98 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 PGK2P07205 417 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 MYZAPP0CAP1 466 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 THRBP10828 461 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 OR1D2P34982 312 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 OR3A1P47881 315 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 CENPAP49450 140 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 RGS7P49802 495 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 MTTPP55157 894 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 GABPB1Q06547 395 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 SREBF2Q12772 1141 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 PDZK1IP1Q13113 114 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 MAPK11Q15759 364 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 UGCGQ16739 394 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 EIF2S3LQ2VIR3 472 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 CTU2Q2VPK5 515 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 PLK5Q496M5 336 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 LACTB2Q53H82 288 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 HSP90AB3PQ58FF7 597 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 LRRC73Q5JTD7 316 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 SUSD4Q5VX71 490 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 ARHGAP17Q68EM7 881 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 SIGLEC15Q6ZMC9 328 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 DET1Q7L5Y6 550 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 GPSM1Q86YR5 675 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 ZDHHC21Q8IVQ6 265 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 FBXL14Q8N1E6 418 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 LRRC43Q8N309 656 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 GBP7Q8N8V2 638 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 CCDC63Q8NA47 563 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 ADPRHL1Q8NDY3 354 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 SLC24A4Q8NFF2 622 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 CMASQ8NFW8 434 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 OR52N4Q8NGI2 321 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 OR13C2Q8NGS9 318 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 AKR7LQ8NHP1 331 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 SLC20A1Q8WUM9 679 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 LPAR1Q92633 364 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 TESK2Q96S53 571 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 PCGF1Q9BSM1 259 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 TPPP3Q9BW30 176 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 ZNF416Q9BWM5 594 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 POLR1EQ9GZS1 481 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 TFB2MQ9H5Q4 396 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 ESRP2Q9H6T0 727 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 MVB12BQ9H7P6 319 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 TRPC7Q9HCX4 862 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 Q9N2K0 584 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 SPAG4Q9NPE6 437 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 GPR108Q9NPR9 543 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 RPRD1BQ9NQG5 326 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 PHPT1Q9NRX4 125 aaPredicted RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 ZMAT5Q9UDW3 170 aaKnown RBP3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 IL20RAQ9UHF4 553 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 ENTPD4Q9Y227 616 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 PADI2Q9Y2J8 665 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 MFHAS1Q9Y4C4 1052 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 N6AMT1Q9Y5N5 214 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 INSL5Q9Y5Q6 135 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 ADGRL3Q9HAR2 1447 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 C1orf167Q5SNV9 1468 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 USP32Q8NFA0 1604 aa3.02□□□□□ -1.93
DEPDC1-204ENST00000489862 SERTM2A0A1B0GWG4 89 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 TMEM189-UBE2V1I3L0A0 370 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 CLDN4O14493 209 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 MED7O43513 233 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 NUDT21O43809 227 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 KIAA0754O94854 1291 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 GH2P01242 217 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 NUDT17P0C025 328 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 RAB40ALP0C0E4 278 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 DLATP10515 647 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 G6PDP11413 515 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 VPREB1P12018 145 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 ALDH4A1P30038 563 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 RFC4P35249 363 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 CYP2J2P51589 502 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 MTCP1P56278 107 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 DSC1Q08554 894 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 HSPB3Q12988 150 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 UBE2V1Q13404 147 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 GIT2Q14161 759 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 GK2Q14410 553 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 EFTUD2Q15029 972 aaKnown RBP eCLIP3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 FUT11Q495W5 492 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 TCTE1Q5JU00 501 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 C18orf65Q6ZTR6 163 aa3.01□□□□□ -1.93
DEPDC1-204ENST00000489862 TMPRSS11BQ86T26 416 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 1044.6 ms