RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 RBM48Q5RL73 367 aaKnown RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TMEM240Q5SV17 173 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CPZQ66K79 652 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 PDE12Q6L8Q7 609 aaKnown RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CAPN13Q6MZZ7 669 aaPredicted RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 MED27Q6P2C8 311 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ZNF773Q6PK81 442 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 SPESP1Q6UW49 350 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CLVS1Q8IUQ0 354 aaPredicted RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TRAPPC5Q8IUR0 188 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ZZZ3Q8IYH5 903 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 PGBD3Q8N328 593 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ZNF366Q8N895 744 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TMIEQ8NEW7 156 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 VPS37AQ8NEZ2 397 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 VN1R2Q8NFZ6 395 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 PJA1Q8NG27 643 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 OR8J2Q8NGG1 315 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 SMG7Q92540 1137 aaKnown RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 BADQ92934 168 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 GFM2Q969S9 779 aaKnown RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ARRDC3Q96B67 414 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ZNF707Q96C28 371 aaPredicted RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CXorf40BQ96DE9 158 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 PYURFQ96I23 114 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ZNF514Q96K75 400 aaPredicted RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 PANX1Q96RD7 426 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 MBOAT4Q96T53 435 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 EFCAB11Q9BUY7 163 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 DUSP26Q9BV47 211 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 OSBPL10Q9BXB5 764 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ASPSCR1Q9BZE9 553 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 GABARAPL1Q9H0R8 117 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 MTIF3Q9H2K0 278 aaKnown RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TOR3AQ9H497 397 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 SOX17Q9H6I2 414 aaPredicted RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 HPS4Q9NQG7 708 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 DYRK4Q9NR20 520 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 SLC6A13Q9NSD5 602 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 THG1LQ9NWX6 298 aaKnown RBP9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 BTNL2Q9UIR0 455 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 BLOC1S6Q9UL45 172 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 KCNE2Q9Y6J6 123 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 AP1M2Q9Y6Q5 423 aa9.23□□□□□ -0.93
RAB3GAP1-205ENST00000489858 MGAT4DA6NG13 374 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 C1QTNF3-AMACRE9PGA6 284 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 C5orf67F2Z3F1 127 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CLIC1O00299 241 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 HS6ST1O60243 411 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 PCDH7O60245 1069 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TRMUO75648 421 aaKnown RBP9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 C1orf105O95561 183 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CPSF4O95639 269 aaKnown RBP9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ZNF682O95780 498 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CLIC3O95833 236 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 SLC16A8O95907 504 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 RB1P06400 928 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 C6P13671 934 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ENGP17813 658 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 SLC5A2P31639 672 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 SHMT2P34897 504 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 RPL3P39023 403 aaKnown RBP9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 MAGEA2P43356 314 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 GPR1P46091 355 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 GABARAPL2P60520 117 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TBPL1P62380 186 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 PPP2R2BQ00005 443 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TOP3AQ13472 1001 aaPredicted RBP9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 IL18R1Q13478 541 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 LAPTM5Q13571 262 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 E2F2Q14209 437 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 GRIN2CQ14957 1233 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 HIST2H2ACQ16777 129 aaPredicted RBP9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 VMACQ2NL98 169 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CCSMST1Q4G0I0 132 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TMEM52BQ4KMG9 183 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CPTPQ5TA50 214 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 BROXQ5VW32 411 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 AP1ARQ63HQ0 302 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 HIST2H2AA3Q6FI13 130 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 RAET1GQ6H3X3 334 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CES5AQ6NT32 575 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ZCCHC8Q6NZY4 707 aaKnown RBP9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 SHQ1Q6PI26 577 aaKnown RBP9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 UNC5DQ6UXZ4 953 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 SLCO4C1Q6ZQN7 724 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TMEM26Q6ZUK4 368 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CAMKMTQ7Z624 323 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 THAP5Q7Z6K1 395 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 DSG4Q86SJ6 1040 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 TMPRSS11BQ86T26 416 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 NLRP8Q86W28 1048 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 C12orf40Q86WS4 652 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ERI1Q8IV48 349 aaKnown RBP9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ZDHHC21Q8IVQ6 265 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 ETFBKMTQ8IXQ9 262 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 RNF175Q8N4F7 328 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 CPA6Q8N4T0 437 aa9.22□□□□□ -0.93
RAB3GAP1-205ENST00000489858 C1orf52Q8N6N3 182 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms