RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 CILP2Q8IUL8 1156 aa8.86□□□□□ -0.99
SNX17-207ENST00000489402 REXO1L1PQ8IX06 675 aa8.86□□□□□ -0.99
SNX17-207ENST00000489402 FBXO15Q8NCQ5 510 aaPredicted RBP8.86□□□□□ -0.99
SNX17-207ENST00000489402 MAGED4Q96JG8 741 aa8.86□□□□□ -0.99
SNX17-207ENST00000489402 ZNF354BQ96LW1 612 aa8.86□□□□□ -0.99
SNX17-207ENST00000489402 VN1R1Q9GZP7 353 aa8.86□□□□□ -0.99
SNX17-207ENST00000489402 INTS10Q9NVR2 710 aaKnown RBP8.86□□□□□ -0.99
SNX17-207ENST00000489402 SCN2AQ99250 2005 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 TCRBV7S3A2A0A539 114 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 OR2W5A6NFC9 320 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 GOLGA6L6A8MZA4 724 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 H7BY64 318 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 KIF5CO60282 957 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 SNRPB2P08579 225 aaKnown RBP8.85□□□□□ -0.99
SNX17-207ENST00000489402 MPC1LP0DKB6 136 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 ENO3P13929 434 aaPredicted RBP8.85□□□□□ -0.99
SNX17-207ENST00000489402 GRNP28799 593 aaKnown RBP8.85□□□□□ -0.99
SNX17-207ENST00000489402 XCR1P46094 333 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 CLCN7P51798 805 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 SMSP52788 366 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 TERF1P54274 439 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 RPS15AP62244 130 aaKnown RBP8.85□□□□□ -0.99
SNX17-207ENST00000489402 PMP22Q01453 160 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 THOC5Q13769 683 aaKnown RBP8.85□□□□□ -0.99
SNX17-207ENST00000489402 PTK6Q13882 451 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 EXT1Q16394 746 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 ACER2Q5QJU3 275 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 ZNF470Q6ECI4 717 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 XKRXQ6PP77 449 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 LANCL3Q6ZV70 420 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 CENPUQ71F23 418 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 CPEB2Q7Z5Q1 589 aaKnown RBP8.85□□□□□ -0.99
SNX17-207ENST00000489402 PLD3Q8IV08 490 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 BEST3Q8N1M1 668 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 ARHGEF39Q8N4T4 335 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 PRELID2Q8N945 189 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 FAM98AQ8NCA5 519 aaKnown RBP8.85□□□□□ -0.99
SNX17-207ENST00000489402 OR9A4Q8NGU2 314 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 OR51Q1Q8NH59 317 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 PRAP1Q96NZ9 151 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 CYTH2Q99418 400 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 SLC30A3Q99726 388 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 KCNK13Q9HB14 408 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 ANKHQ9HCJ1 492 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 CCDC177Q9NQR7 707 aaPredicted RBP8.85□□□□□ -0.99
SNX17-207ENST00000489402 HOMER3Q9NSC5 361 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 TMEM184CQ9NVA4 438 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 HCN3Q9P1Z3 774 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 KLHL42Q9P2K6 505 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 PCDHGB6Q9Y5F9 930 aa8.85□□□□□ -0.99
SNX17-207ENST00000489402 IGHV3-20A0A0C4DH32 117 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 FAM227AF5H4B4 570 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 ZNHIT1O43257 154 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 FGGP02679 453 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 CD46P15529 392 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 IL1RNP18510 177 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 POU3F2P20265 443 aaPredicted RBP8.84□□□□□ -0.99
SNX17-207ENST00000489402 AGAP20933 346 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 EEF1DP29692 281 aaKnown RBP8.84□□□□□ -0.99
SNX17-207ENST00000489402 GRK3P35626 688 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 SKIV2L2P42285 1042 aaKnown RBP8.84□□□□□ -0.99
SNX17-207ENST00000489402 TAS2R50P59544 299 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 ALDH6A1Q02252 535 aaKnown RBP8.84□□□□□ -0.99
SNX17-207ENST00000489402 CUL1Q13616 776 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 DHX34Q14147 1143 aaKnown RBP8.84□□□□□ -0.99
SNX17-207ENST00000489402 MEP1AQ16819 746 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 KRTCAP3Q53RY4 240 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 FCRLBQ6BAA4 426 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 UBE2R2Q712K3 238 aaPredicted RBP8.84□□□□□ -0.99
SNX17-207ENST00000489402 ANKRD37Q7Z713 158 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 HORMAD2Q8N7B1 307 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 TMEM178AQ8NBL3 297 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 CAMKVQ8NCB2 501 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 ZCCHC10Q8TBK6 192 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 THAP3Q8WTV1 239 aaPredicted RBP8.84□□□□□ -0.99
SNX17-207ENST00000489402 ASB11Q8WXH4 323 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 KCNJ9Q92806 393 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 ZNF669Q96BR6 464 aaPredicted RBP8.84□□□□□ -0.99
SNX17-207ENST00000489402 THAP11Q96EK4 314 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 LURAP1Q96LR2 239 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 UTP23Q9BRU9 249 aaKnown RBP8.84□□□□□ -0.99
SNX17-207ENST00000489402 FAM129AQ9BZQ8 928 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 PCBD2Q9H0N5 130 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 KLHL1Q9NR64 748 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 COMMD10Q9Y6G5 202 aa8.84□□□□□ -0.99
SNX17-207ENST00000489402 KCNE1BA0A087WTH5 132 aa8.83□□□□□ -1
SNX17-207ENST00000489402 FAM237BA0A1B0GVD1 139 aa8.83□□□□□ -1
SNX17-207ENST00000489402 MAGEB16A2A368 324 aa8.83□□□□□ -1
SNX17-207ENST00000489402 GFYI3L273 518 aa8.83□□□□□ -1
SNX17-207ENST00000489402 SGK494L7N484 410 aa8.83□□□□□ -1
SNX17-207ENST00000489402 AVILO75366 819 aa8.83□□□□□ -1
SNX17-207ENST00000489402 SLC35G6P0C7Q6 338 aa8.83□□□□□ -1
SNX17-207ENST00000489402 IMPA1P29218 277 aa8.83□□□□□ -1
SNX17-207ENST00000489402 BCL6P41182 706 aa8.83□□□□□ -1
SNX17-207ENST00000489402 KCNJ1P48048 391 aa8.83□□□□□ -1
SNX17-207ENST00000489402 VPS41P49754 854 aa8.83□□□□□ -1
SNX17-207ENST00000489402 RIPPLY3P57055 190 aa8.83□□□□□ -1
SNX17-207ENST00000489402 TBPL1P62380 186 aa8.83□□□□□ -1
SNX17-207ENST00000489402 OC90Q02509 493 aaPredicted RBP8.83□□□□□ -1
SNX17-207ENST00000489402 ACTN3Q08043 901 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms