RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 EHD1Q9H4M9 534 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 SLCO1B3Q9NPD5 702 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 PNPOQ9NVS9 261 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 THAP1Q9NVV9 213 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 TCP11X1B4DZS4 312 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 AGRPO00253 132 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 CTSVO60911 334 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 ESRRBO95718 433 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 CAPN1P07384 714 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 THRAP10827 490 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 HRH2P25021 359 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 SERPINB3P29508 390 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 ARL1P40616 181 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-229ENST00000486665 EIF2S3P41091 472 aaKnown RBP12.24□□□□□ -0.45
HDAC6-229ENST00000486665 PDX1P52945 283 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 REEP5Q00765 189 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 GALNT1Q10472 559 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-229ENST00000486665 CPSF6Q16630 551 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC6-229ENST00000486665 TCHHL1Q5QJ38 904 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-229ENST00000486665 CDCP2Q5VXM1 449 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 GRHL2Q6ISB3 625 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 RGS9BPQ6ZS82 235 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 MYLK4Q86YV6 388 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-229ENST00000486665 DNAJC22Q8N4W6 341 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 ZNF781Q8N8C0 355 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 CDYL2Q8N8U2 506 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 C19orf47Q8N9M1 422 aaKnown RBP12.24□□□□□ -0.45
HDAC6-229ENST00000486665 RCBTB1Q8NDN9 531 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 WDR48Q8TAF3 677 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 GRAMD1AQ96CP6 724 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 NXPE2Q96DL1 559 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 FCRL4Q96PJ5 515 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 PRORYQ9H606 182 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 CCDC134Q9H6E4 229 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 EML4Q9HC35 981 aaKnown RBP12.24□□□□□ -0.45
HDAC6-229ENST00000486665 ANKMY1Q9P2S6 941 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 PILRAQ9UKJ1 303 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 TRAF6Q9Y4K3 522 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 TIMM22Q9Y584 194 aa12.24□□□□□ -0.45
HDAC6-229ENST00000486665 TMEM233B4DJY2 109 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 FFAR3O14843 346 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 GPR42O15529 346 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 UGDHO60701 494 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 ZBTB11O95625 1053 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-229ENST00000486665 MT-CO3P00414 261 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 CTSBP07858 339 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 FGF4P08620 206 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 HGFP14210 728 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 BCL6P41182 706 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 HNF4AP41235 474 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 SCTRP47872 440 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 LAPTM5Q13571 262 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 KCNAB1Q14722 419 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 RBBP5Q15291 538 aaKnown RBP12.23□□□□□ -0.45
HDAC6-229ENST00000486665 ZRSR2Q15696 482 aaKnown RBP12.23□□□□□ -0.45
HDAC6-229ENST00000486665 UGT3A2Q3SY77 523 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 SH2D4BQ5SQS7 431 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 PHF19Q5T6S3 580 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 CLEC6AQ6EIG7 209 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 ADNP2Q6IQ32 1131 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 RBM44Q6ZP01 1051 aaKnown RBP12.23□□□□□ -0.45
HDAC6-229ENST00000486665 CARFQ8N187 725 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 RNF175Q8N4F7 328 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 ANKRD53Q8N9V6 530 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 METTL6Q8TCB7 284 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 AGR3Q8TD06 166 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 MTFMTQ96DP5 389 aaKnown RBP12.23□□□□□ -0.45
HDAC6-229ENST00000486665 TCTN2Q96GX1 697 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 SLC41A2Q96JW4 573 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 AIF1LQ9BQI0 150 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 EFCAB11Q9BUY7 163 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 ILKAPQ9H0C8 392 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-229ENST00000486665 ZNF768Q9H5H4 540 aaKnown RBP12.23□□□□□ -0.45
HDAC6-229ENST00000486665 NT5DC2Q9H857 520 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 TRPS1Q9UHF7 1281 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 HAO1Q9UJM8 370 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 STK38LQ9Y2H1 464 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-229ENST00000486665 RAP2CQ9Y3L5 183 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 ZNF462Q96JM2 2506 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 PCM1Q15154 2024 aa12.23□□□□□ -0.45
HDAC6-229ENST00000486665 COL27A1Q8IZC6 1860 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-229ENST00000486665 LOC105369274A0A096LPK9 316 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 LOC102723532A0A0G2JNH3 316 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 A0A0J9YVX5 310 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 TRBC2A0A5B9 178 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 H0YIV9 168 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 MANBAO00462 879 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 AZIN1O14977 448 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 TOX3O15405 576 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-229ENST00000486665 OR1F1O43749 312 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 BRINP1O60477 761 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 STATHP02808 62 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 ENO1P06733 434 aaKnown RBP12.22□□□□□ -0.45
HDAC6-229ENST00000486665 ANKRD34CP0C6C1 535 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 FOLR1P15328 257 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 NELFEP18615 380 aaKnown RBP12.22□□□□□ -0.45
HDAC6-229ENST00000486665 CXCR2P25025 360 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 GABRA4P48169 554 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 HTR6P50406 440 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms