RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TBPL1P62380 186 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 ZNF33BQ06732 778 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 LONRF1Q17RB8 773 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 MINDY4Q4G0A6 757 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 OR51Q1Q8NH59 317 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 MARVELD3Q96A59 401 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 MS4A14Q96JA4 679 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 SIGLEC10Q96LC7 697 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 AARSD1Q9BTE6 412 aaKnown RBP18.19■□□□□ 0.5
COL27A1-205ENST00000485397 RNF32Q9H0A6 362 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 HCN3Q9P1Z3 774 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 ADAMTS6Q9UKP5 1117 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 NEU2Q9Y3R4 380 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 MAD1L1Q9Y6D9 718 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 MYO7BQ6PIF6 2116 aa18.19■□□□□ 0.5
COL27A1-205ENST00000485397 FEZF1A0PJY2 475 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 PRSS44E7EML9 344 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 SGK494L7N484 410 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 HNRNPRO43390 633 aaKnown RBP18.18■□□□□ 0.5
COL27A1-205ENST00000485397 PRAMEF2O60811 474 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 UNC5CO95185 931 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 RASAL1O95294 804 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 COILP38432 576 aaPredicted RBP18.18■□□□□ 0.5
COL27A1-205ENST00000485397 MAGEA3P43357 314 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 RPS15AP62244 130 aaKnown RBP18.18■□□□□ 0.5
COL27A1-205ENST00000485397 AP2B1P63010 937 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 CSNK1G2P78368 415 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 PMP22Q01453 160 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 HSP90AA5PQ58FG0 334 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 TMEM214Q6NUQ4 689 aaKnown RBP18.18■□□□□ 0.5
COL27A1-205ENST00000485397 MBOAT1Q6ZNC8 495 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 CPEB2Q7Z5Q1 589 aaKnown RBP18.18■□□□□ 0.5
COL27A1-205ENST00000485397 ZCCHC10Q8TBK6 192 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 ATG10Q9H0Y0 220 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 IARS2Q9NSE4 1012 aaKnown RBP18.18■□□□□ 0.5
COL27A1-205ENST00000485397 ABI3Q9P2A4 366 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 COPG2Q9UBF2 871 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 PDE10AQ9Y233 779 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 COMMD10Q9Y6G5 202 aa18.18■□□□□ 0.5
COL27A1-205ENST00000485397 KCNE1BA0A087WTH5 132 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 TRGV8A0A0C4DH27 118 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 LCMT2O60294 686 aaKnown RBP18.17■□□□□ 0.5
COL27A1-205ENST00000485397 WISP2O76076 250 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 HRH2P25021 359 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 TNFRSF8P28908 595 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 BCL6P41182 706 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 XCR1P46094 333 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 ST13P50502 369 aaKnown RBP18.17■□□□□ 0.5
COL27A1-205ENST00000485397 TIAL1Q01085 375 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL27A1-205ENST00000485397 BTBD16Q32M84 506 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 FCRLBQ6BAA4 426 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 LMNTD2Q8IXW0 634 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 RASGEF1CQ8N431 466 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 SUN3Q8TAQ9 357 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 CALML6Q8TD86 181 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 MCOLN3Q8TDD5 553 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 EEF1AKMT1Q8WVE0 214 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 ALKBH8Q96BT7 664 aaKnown RBP18.17■□□□□ 0.5
COL27A1-205ENST00000485397 CCDC138Q96M89 665 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 NDNQ99608 321 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 UNKQ9C0B0 810 aaKnown RBP18.17■□□□□ 0.5
COL27A1-205ENST00000485397 TRMT6Q9UJA5 497 aaKnown RBP18.17■□□□□ 0.5
COL27A1-205ENST00000485397 CPAMD8Q8IZJ3 1885 aa18.17■□□□□ 0.5
COL27A1-205ENST00000485397 CELSR2Q9HCU4 2923 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 CRYABP02511 175 aaKnown RBP18.16■□□□□ 0.5
COL27A1-205ENST00000485397 NAE1Q13564 534 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 PLAG1Q6DJT9 500 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 CCDC137Q6PK04 289 aaKnown RBP18.16■□□□□ 0.5
COL27A1-205ENST00000485397 AGTRAPQ6RW13 159 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 TMEM207Q6UWW9 146 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 ANKRD37Q7Z713 158 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 LRRC8AQ8IWT6 810 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 NAT8LQ8N9F0 302 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 KCT2Q8NC54 265 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 CAMKVQ8NCB2 501 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 DNAJB8Q8NHS0 232 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 TM4SF19Q96DZ7 209 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 THAP11Q96EK4 314 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 SEC14L3Q9UDX4 400 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 C19orf25Q9UFG5 118 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-205ENST00000485397 TEKT2Q9UIF3 430 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 SCN3AQ9NY46 2000 aa18.16■□□□□ 0.5
COL27A1-205ENST00000485397 EIF3FO00303 357 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-205ENST00000485397 RDH16O75452 317 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 GRNP28799 593 aaKnown RBP18.15■□□□□ 0.5
COL27A1-205ENST00000485397 CCZ1BP86790 482 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 CCZ1P86791 482 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-205ENST00000485397 PTK6Q13882 451 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 CYP1B1Q16678 543 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 ZNF766Q5HY98 468 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 ASPGQ86U10 573 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 SLC26A11Q86WA9 606 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 C17orf64Q86WR6 236 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 PDSS2Q86YH6 399 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 BEST3Q8N1M1 668 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
COL27A1-205ENST00000485397 ITLN2Q8WWU7 325 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-205ENST00000485397 CCDC120Q96HB5 630 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 FAM167BQ9BTA0 163 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 RBCK1Q9BYM8 510 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms