RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 KRT78Q8N1N4 520 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 MFSD9Q8NBP5 474 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ABHD11Q8NFV4 315 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 SLC13A3Q8WWT9 602 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 CCT6BQ92526 530 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TTC9Q92623 222 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ISL2Q96A47 359 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ZNF285Q96NJ3 590 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 BBC3Q96PG8 261 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 OR4K3Q96R72 315 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TMEM79Q9BSE2 394 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 DRC3Q9H069 523 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 AKIRIN1Q9H9L7 192 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ZNF304Q9HCX3 659 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TMCO1Q9UM00 188 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 PTRH2Q9Y3E5 179 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 MAU2Q9Y6X3 613 aa11.19□□□□□ -0.62
CDK5RAP2-217ENST00000484546 PCM1Q15154 2024 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 MGAQ8IWI9 3026 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 IGSF10Q6WRI0 2623 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 KCNE1BA0A087WTH5 132 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 URADA6NGE7 173 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 NKX2-8O15522 239 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TAPBPO15533 448 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 STATHP02808 62 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ITGB2P05107 769 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TUBBP07437 444 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 C1GALT1C1LP0DN25 315 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ITGAXP20702 1163 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 GGT5P36269 586 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 BCL6P41182 706 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 MAGEA12P43365 314 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 OR1D4P47884 311 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 SLC6A12P48065 614 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 SKP1P63208 163 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 HIST2H2ACQ16777 129 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 PFKFB4Q16877 469 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 XKR6Q5GH73 641 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 PAGE2BQ5JRK9 111 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 HIST2H2AA3Q6FI13 130 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 PCSK4Q6UW60 755 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 FAM198BQ6UWH4 519 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ZNF517Q6ZMY9 492 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 RAB43Q86YS6 212 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TTLQ8NG68 377 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ZCCHC10Q8TBK6 192 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ESAMQ96AP7 390 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 FKBP10Q96AY3 582 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 MVB12AQ96EY5 273 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 MMABQ96EY8 250 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ATOH8Q96SQ7 321 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 RUFY1Q96T51 708 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 CD244Q9BZW8 370 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ANKHQ9HCJ1 492 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 XPR1Q9UBH6 696 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 PTBP2Q9UKA9 531 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 NXT1Q9UKK6 140 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TCFL5Q9UL49 500 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 POLHQ9Y253 713 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 MAN2B2Q9Y2E5 1009 aa11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TNPO3Q9Y5L0 923 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP2-217ENST00000484546 FER1L5A0AVI2 2057 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ANKRD12Q6UB98 2062 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ANKDD1BA6NHY2 528 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 GOLGA8RI6L899 631 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 K7EPI3 171 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ERVH48-1M5A8F1 160 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ATXN7O15265 892 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 P2RX6O15547 441 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 SHBGP04278 402 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 EPB42P16452 691 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TAC1P20366 129 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 VARSP26640 1264 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 OTX2P32243 289 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 HPDP32754 393 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 HSD17B3P37058 310 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 CCR10P46092 362 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 PIK3CGP48736 1102 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ALDH18A1P54886 795 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 REEP5Q00765 189 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 IRF8Q02556 426 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 LAPTM5Q13571 262 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 SLBPQ14493 270 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 UGT8Q16880 541 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ZXDCQ2QGD7 858 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 PRTGQ2VWP7 1150 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 DEFB109BQ30KR1 87 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 CRTC2Q53ET0 693 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 SOWAHCQ53LP3 525 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TECRLQ5HYJ1 363 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ZNF385CQ66K41 422 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ATG9BQ674R7 924 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 LCN10Q6JVE6 187 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 BORAQ6PGQ7 559 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 TIFABQ6ZNK6 161 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 ABHD13Q7L211 337 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 LCA5Q86VQ0 697 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 MYLK4Q86YV6 388 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 KLHDC8AQ8IYD2 350 aa11.17□□□□□ -0.62
CDK5RAP2-217ENST00000484546 PLD6Q8N2A8 252 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms