RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 H7BY64 318 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 MT-ND1P03886 318 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 PIM1P11309 404 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ACADMP11310 421 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ACPPP15309 386 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 AK4P27144 223 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 S100A3P33764 101 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 EEFSECP57772 596 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZNF33BQ06732 778 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 MTAPQ13126 283 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 TDGQ13569 410 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 CYP2A13Q16696 494 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 HKDC1Q2TB90 917 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 RUNDC3AQ59EK9 446 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 AP1ARQ63HQ0 302 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 GALNT13Q8IUC8 556 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ADHFE1Q8IWW8 467 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ADGRG5Q8IZF4 528 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ANKRD53Q8N9V6 530 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR8J3Q8NGG0 315 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR1E3Q8WZA6 343 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 SCARF2Q96GP6 870 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 LRGUKQ96M69 825 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRAP1Q96NZ9 151 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 FERD3LQ96RJ6 166 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 EFCAB11Q9BUY7 163 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 THUMPD3Q9BV44 507 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 SORBS1Q9BX66 1292 aaKnown RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 EHD1Q9H4M9 534 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 FBRSQ9HAH7 460 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 DMRT3Q9NQL9 472 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 BATF3Q9NR55 127 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 CCM2LQ9NUG4 571 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 ACSL5Q9ULC5 683 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 AURKCQ9UQB9 309 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 DYRK1BQ9Y463 629 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 SNX13Q9Y5W8 968 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 V9GYQ6 96 aa8.5□□□□□ -1.05
CDC42SE1-204ENST00000483763 DHRS12A0PJE2 317 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 FEZF1A0PJY2 475 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 ARHGAP10A1A4S6 786 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRSS38A1L453 326 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 FAM149AA5PLN7 773 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 TPST1O60507 370 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 ANXA4P09525 319 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 SRFP11831 508 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 HSD3B1P14060 373 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRPS1L1P21108 318 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 HSD3B2P26439 372 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 HTR1EP28566 365 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 BNIP2Q12982 314 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CYP51A1Q16850 503 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CMPK2Q5EBM0 449 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 MTX3Q5HYI7 312 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 LCTLQ6UWM7 567 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 TMIGD1Q6UXZ0 262 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 RD3Q7Z3Z2 195 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 COMMD6Q7Z4G1 85 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 GPR180Q86V85 440 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 TBC1D21Q8IYX1 336 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CLECL1Q8IZS7 167 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CACTIN-AS1Q8N1I8 211 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 WDR48Q8TAF3 677 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 JPH3Q8WXH2 748 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 TSACCQ96A04 125 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 TIMM29Q9BSF4 260 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 TBCDQ9BTW9 1192 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 TRIT1Q9H3H1 467 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 KAT8Q9H7Z6 458 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CARS2Q9HA77 564 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 C11orf16Q9NQ32 467 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 TBC1D29Q9UFV1 150 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CA14Q9ULX7 337 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 MMP17Q9ULZ9 603 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 SCML1Q9UN30 329 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 RUVBL1Q9Y265 456 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 LRCH1Q9Y2L9 728 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 PCDHGA4Q9Y5G9 962 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 AQP12BA6NM10 295 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CACNB4O00305 520 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 FOXE1O00358 373 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 GPR37O15354 613 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZNF26P17031 533 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CKMT2P17540 419 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 KIR3DL1P43629 444 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CYP4F2P78329 520 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 MC1RQ01726 317 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 CYP4F3Q08477 520 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 GAS6Q14393 721 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 ARHGAP19Q14CB8 494 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 SPATS1Q496A3 300 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 LRIF1Q5T3J3 769 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 GLYATQ6IB77 296 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 ENPP7Q6UWV6 458 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 GCNT7Q6ZNI0 430 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 PLD3Q8IV08 490 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 AQP12AQ8IXF9 295 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 MMP21Q8N119 569 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms