RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DHCR7Q9UBM7 475 aaKnown RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 PLCL2Q9UPR0 1127 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ICKQ9UPZ9 632 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 CDYLQ9Y232 598 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 TDRKHQ9Y2W6 561 aaKnown RBP5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ALG6Q9Y672 507 aa5.64□□□□□ -1.51
CSDE1-207ENST00000483407 ZNF106Q9H2Y7 1883 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 TRBV5-4A0A0C4DH59 114 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CCDC78A2IDD5 438 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 FAM90A27PA6NNH2 459 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ISM1B1AKI9 464 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 H3BMH7 237 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 H7C0S8 307 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CCL22O00626 93 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 KCNN4O15554 427 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 HNRNPRO43390 633 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 MFAP3LO75121 409 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 AP2A1O95782 977 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 FTH1P02794 183 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CHRM5P08912 532 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 RBP3P10745 1247 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ITGAXP20702 1163 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 MMP11P24347 488 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CD40P25942 277 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 TNFRSF8P28908 595 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CETN2P41208 172 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 NSG1P42857 185 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ARSFP54793 590 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 HADHBP55084 474 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 EIF3EP60228 445 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 OTUD4Q01804 1114 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CACNG1Q06432 222 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CDC16Q13042 620 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ITIH4Q14624 930 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 SLC9A5Q14940 896 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 KIR2DS3Q14952 304 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ZIC1Q15915 447 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 SLC5A12Q1EHB4 618 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ZNF658BQ4V348 819 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 SYTL3Q4VX76 610 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CRB2Q5IJ48 1285 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 BICRALQ6AI39 1079 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 NXNQ6DKJ4 435 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 DARS2Q6PI48 645 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 FRMD7Q6ZUT3 714 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 PPP1R32Q7Z5V6 425 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CUZD1Q86UP6 607 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 TRIM73Q86UV7 250 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CNGA4Q8IV77 575 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 WDR75Q8IWA0 830 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 SRRM1Q8IYB3 904 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CLDN19Q8N6F1 224 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 OR5AR1Q8NGP9 310 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 OR5K2Q8NHB8 316 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 DNAJB14Q8TBM8 379 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ACTL9Q8TC94 416 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 STYXQ8WUJ0 223 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ELMO1Q92556 727 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 INPP5DQ92835 1189 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 FKBP10Q96AY3 582 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 SLC22A18Q96BI1 424 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 DNAJC1Q96KC8 554 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 C16orf92Q96LL3 132 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 SPATA13Q96N96 652 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 OR2A14Q96R47 310 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 RANBP9Q96S59 729 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 BARD1Q99728 777 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 TBL1YQ9BQ87 522 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 GORASP1Q9BQQ3 440 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 C10orf88Q9H8K7 445 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ARNT2Q9HBZ2 717 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 MRM3Q9HC36 420 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 LUC7LQ9NQ29 371 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 NLE1Q9NVX2 485 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 SMARCAL1Q9NZC9 954 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 MYOTQ9UBF9 498 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 ZNF180Q9UJW8 692 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 CDC23Q9UJX2 597 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 FBXL4Q9UKA2 621 aa5.63□□□□□ -1.51
CSDE1-207ENST00000483407 NXT1Q9UKK6 140 aaKnown RBP5.63□□□□□ -1.51
CSDE1-207ENST00000483407 A0A1B0GUH1 482 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 A0A1B0GX78 115 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TCRBV5S2A0A599 114 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 PJA2O43164 708 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 LRRTM2O43300 516 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 CNOT3O75175 753 aaKnown RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TJP3O95049 919 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 RPN2P04844 631 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 PTMAP06454 111 aaKnown RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 UMODP07911 640 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 OR56A5P0C7T3 313 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 MSNP26038 577 aaKnown RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 ELAVL4P26378 380 aaKnown RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 ACADLP28330 430 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 MAGEA1P43355 309 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TSFMP43897 325 aaKnown RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 GABRA4P48169 554 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 RAB28P51157 221 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 MSLNQ13421 630 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 OLIG2Q13516 323 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms