RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 CTBP1Q13363 440 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 GARNL3Q5VVW2 1013 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 KIAA0930Q6ICG6 404 aaPredicted RBP13.14□□□□□ -0.31
VARS-226ENST00000483275 NEPROQ6NW34 567 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 CRLF3Q8IUI8 442 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 CILP2Q8IUL8 1156 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 PRELID2Q8N945 189 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 ZNF669Q96BR6 464 aaPredicted RBP13.14□□□□□ -0.31
VARS-226ENST00000483275 LURAP1Q96LR2 239 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 NPAS2Q99743 824 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 TUBB6Q9BUF5 446 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 RNF32Q9H0A6 362 aa13.14□□□□□ -0.31
VARS-226ENST00000483275 KLF2Q9Y5W3 355 aaPredicted RBP13.14□□□□□ -0.31
VARS-226ENST00000483275 GOLGA8MH3BSY2 632 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 RDH16O75452 317 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 FGGP02679 453 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 OGNP20774 298 aaKnown RBP13.13□□□□□ -0.31
VARS-226ENST00000483275 IMPA1P29218 277 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 AVPR1BP47901 424 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 TBPL1P62380 186 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 HSF1Q00613 529 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 TUBA3CQ13748 450 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 ARHGAP19Q14CB8 494 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 RPS6KA1Q15418 735 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 CCNG2Q16589 344 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 ACER2Q5QJU3 275 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 TUBA3EQ6PEY2 450 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 C3P1Q6ZMU1 363 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 GDF7Q7Z4P5 450 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 CPEB2Q7Z5Q1 589 aaKnown RBP13.13□□□□□ -0.31
VARS-226ENST00000483275 ANKRD37Q7Z713 158 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 PDSS2Q86YH6 399 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 LRRC56Q8IYG6 542 aaPredicted RBP13.13□□□□□ -0.31
VARS-226ENST00000483275 CPNE9Q8IYJ1 553 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 ZNF808Q8N4W9 903 aaPredicted RBP13.13□□□□□ -0.31
VARS-226ENST00000483275 OR51Q1Q8NH59 317 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 METTL21AQ8WXB1 218 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 TSLPQ969D9 159 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 CYTH2Q99418 400 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 GPR21Q99679 349 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 TRIM8Q9BZR9 551 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 ITGB1BP2Q9UKP3 347 aa13.13□□□□□ -0.31
VARS-226ENST00000483275 CTAGE9A4FU28 777 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 B3GALT4O96024 378 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 TPSB2P20231 275 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 CXCR5P32302 372 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 BCL6P41182 706 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 SLC1A2P43004 574 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 KRTAP10-9P60411 292 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 MPP1Q00013 466 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 TPSAB1Q15661 275 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 ZNF630Q2M218 657 aaPredicted RBP13.12□□□□□ -0.31
VARS-226ENST00000483275 ZXDCQ2QGD7 858 aaPredicted RBP13.12□□□□□ -0.31
VARS-226ENST00000483275 PLAG1Q6DJT9 500 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 SPINK14Q6IE38 97 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 UBE2R2Q712K3 238 aaPredicted RBP13.12□□□□□ -0.31
VARS-226ENST00000483275 CAND1Q86VP6 1230 aaKnown RBP13.12□□□□□ -0.31
VARS-226ENST00000483275 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
VARS-226ENST00000483275 KCT2Q8NC54 265 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 MDS2Q8NDY4 140 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 OR5T3Q8NGG3 340 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 ASB11Q8WXH4 323 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
VARS-226ENST00000483275 MAGED4Q96JG8 741 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 TCF12Q99081 682 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 KCNK13Q9HB14 408 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 TEKT2Q9UIF3 430 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 ADAMTS6Q9UKP5 1117 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 DRG1Q9Y295 367 aaKnown RBP13.12□□□□□ -0.31
VARS-226ENST00000483275 MED13LQ71F56 2210 aa13.12□□□□□ -0.31
VARS-226ENST00000483275 ZNF839A8K0R7 811 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 NPIPA5E9PKD4 350 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 NRDCO43847 1150 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 KIF5CO60282 957 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 NSA2O95478 260 aaKnown RBP13.11□□□□□ -0.31
VARS-226ENST00000483275 CD96P40200 585 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 ADARP55265 1226 aaKnown RBP13.11□□□□□ -0.31
VARS-226ENST00000483275 OLR1P78380 273 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 ABATP80404 500 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 MEF2AQ02078 507 aaPredicted RBP13.11□□□□□ -0.31
VARS-226ENST00000483275 RBPJQ06330 500 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 GPS1Q13098 491 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 DHX34Q14147 1143 aaKnown RBP13.11□□□□□ -0.31
VARS-226ENST00000483275 FAM53BQ14153 422 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 ABRAXAS2Q15018 415 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 OR1C1Q15619 314 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 NDUFA9Q16795 377 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 LONRF1Q17RB8 773 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 SFT2D3Q587I9 215 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 TMEM214Q6NUQ4 689 aaKnown RBP13.11□□□□□ -0.31
VARS-226ENST00000483275 RPTNQ6XPR3 784 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 ZNF295-AS1Q8N0V1 137 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 AGGF1Q8N302 714 aaeCLIP13.11□□□□□ -0.31
VARS-226ENST00000483275 KIF2BQ8N4N8 673 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 DNAJB8Q8NHS0 232 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 CD200R1Q8TD46 325 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 PEX11GQ96HA9 241 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 NDNQ99608 321 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 ATG10Q9H0Y0 220 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms