RNA–Protein interactions for RNA: ENST00000483039.5

TNFSF13-208, Transcript of TNF superfamily member 13, humanhuman

TSL 2 BASIC

Gene TNFSF13, Length 959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-208ENST00000483039 PRMT3O60678 531 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 NSA2O95478 260 aaKnown RBP16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 ERGP11308 486 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 TFEBP19484 476 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 RPA3P35244 121 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 XCR1P46094 333 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 CYB561P49447 251 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 HADHBP55084 474 aaKnown RBP16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 PMPCAQ10713 525 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 SEMA3AQ14563 771 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 FASTKD1Q53R41 847 aaKnown RBP16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 ZNF534Q76KX8 674 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 PCGF5Q86SE9 256 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 RPS19BP1Q86WX3 136 aaKnown RBP16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 ZNF227Q86WZ6 799 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 RPRMLQ8N4K4 120 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 MCOLN3Q8TDD5 553 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 TMEM125Q96AQ2 219 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 RMND5BQ96G75 393 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 DNAJC7Q99615 494 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 FAM118BQ9BPY3 351 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 ZNHIT6Q9NWK9 470 aaKnown RBP16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 PCYOX1Q9UHG3 505 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 RIMKLBQ9ULI2 386 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 L3MBTL1Q9Y468 752 aa16.91■□□□□ 0.3
TNFSF13-208ENST00000483039 OR2W5A6NFC9 320 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 PRMT5O14744 637 aaPredicted RBP16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 PJA2O43164 708 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 CDC40O60508 579 aaKnown RBP eCLIP16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 METTL18O95568 372 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 SNRPNP63162 240 aaKnown RBP16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 TPM4P67936 248 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 PRDX1Q06830 199 aaKnown RBP16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 ACTN3Q08043 901 aaPredicted RBP16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 USP10Q14694 798 aaKnown RBP16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 SKOR2Q2VWA4 1001 aaPredicted RBP16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 SFT2D3Q587I9 215 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 CMPK2Q5EBM0 449 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 ARHGAP11AQ6P4F7 1023 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 SUSD1Q6UWL2 747 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 CAMKMTQ7Z624 323 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 OR6P1Q8NGX9 317 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 KRT35Q92764 455 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 CCDC42Q96M95 316 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 PLSCR2Q9NRY7 297 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 SLC2A6Q9UGQ3 507 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 PLEKHA6Q9Y2H5 1048 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 KLF13Q9Y2Y9 288 aaPredicted RBP16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 ZNF407Q9C0G0 2248 aa16.9■□□□□ 0.3
TNFSF13-208ENST00000483039 SCN3AQ9NY46 2000 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 CSPG4Q6UVK1 2322 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 KLRC4-KLRK1H3BQV0 150 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 HS6ST1O60243 411 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 CCNDBP1O95273 360 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 TPP2P29144 1249 aaPredicted RBP16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 MEOX1P50221 254 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 DGKQP52824 942 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 NUP107P57740 925 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 SLC26A5P58743 744 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 ACVR1Q04771 509 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 P3H1Q32P28 736 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 AARS2Q5JTZ9 985 aaKnown RBP16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 TSTD2Q5T7W7 516 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 ICE2Q659A1 982 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 PTRHD1Q6GMV3 140 aaKnown RBP16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 OTOAQ7RTW8 1153 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 LINC00523Q86TU6 105 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 SHISA5Q8N114 240 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 PLPP5Q8NEB5 264 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 OR9A1PQ8NGU1 263 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 C16orf52Q8NHV5 167 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 ELP5Q8TE02 316 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 MBD6Q96DN6 1003 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 CHP1Q99653 195 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 CLEC4MQ9H2X3 399 aaPredicted RBP16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 TAC3Q9UHF0 121 aa16.89■□□□□ 0.29
TNFSF13-208ENST00000483039 MBD3O95983 291 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 TRHRP34981 398 aaPredicted RBP16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 BCL6P41182 706 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 PRAMEP78395 509 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 ARHGAP19Q14CB8 494 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 NSDHLQ15738 373 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 ANKRD20A4Q4UJ75 823 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 EMC4Q5J8M3 183 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 Q71RC1 249 aaPredicted RBP16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 PRSS41Q7RTY9 318 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 SULF2Q8IWU5 870 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 C18orf12Q96KH6 178 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 MDFIQ99750 246 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 SMR3AQ99954 134 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 GPATCH1Q9BRR8 931 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 OSBPL8Q9BZF1 889 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 NHEJ1Q9H9Q4 299 aaPredicted RBP16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 RASSF1Q9NS23 344 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 HCN3Q9P1Z3 774 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 ANAPC5Q9UJX4 755 aa16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 R3HDM2Q9Y2K5 976 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 FN1P02751 2386 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-208ENST00000483039 RTTNQ86VV8 2226 aa16.87■□□□□ 0.29
TNFSF13-208ENST00000483039 MATN4O95460 622 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms