RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CATSPER1Q8NEC5 780 aa12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 OR1N1Q8NGS0 311 aa12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 GRHL3Q8TE85 626 aa12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 FAR1Q8WVX9 515 aa12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 HAS2Q92819 552 aa12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 ALKBH8Q96BT7 664 aaKnown RBP12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 TUBB6Q9BUF5 446 aa12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 FAM129AQ9BZQ8 928 aa12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 ATG10Q9H0Y0 220 aa12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 PPANQ9NQ55 473 aaKnown RBP12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 PDE10AQ9Y233 779 aa12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 MRPS2Q9Y399 296 aaKnown RBP12.75□□□□□ -0.37
CTDSP1-208ENST00000482272 LOC102723996A0A087X1L8 192 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 A1L4Q6 167 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 TP73O15350 636 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 NSA2O95478 260 aaKnown RBP12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 C8orf89P0DMQ9 161 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 MYBL2P10244 700 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 TCP1P17987 556 aaKnown RBP12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 IL2P60568 153 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 MAT1AQ00266 395 aaKnown RBP12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 NAE1Q13564 534 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 BBS9Q3SYG4 887 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 HIST2H2BCQ6DN03 193 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 CAPN13Q6MZZ7 669 aaPredicted RBP12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 FAM180AQ6UWF9 173 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 LCTLQ6UWM7 567 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 PDIK1LQ8N165 341 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 CAMKVQ8NCB2 501 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 OR9A4Q8NGU2 314 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 BRIX1Q8TDN6 353 aaKnown RBP12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 PSMF1Q92530 271 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 SLCO2A1Q92959 643 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 TRIM54Q9BYV2 358 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 ZNF700Q9H0M5 742 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 GRPEL1Q9HAV7 217 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 ANKHQ9HCJ1 492 aa12.74□□□□□ -0.37
CTDSP1-208ENST00000482272 TRAV17A0A0B4J275 112 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 LDLRP01130 860 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 CYC1P08574 325 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 SOX11P35716 441 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 CDKN2DP55273 166 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 CSNK1G2P78368 415 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 PDAP1Q13442 181 aaKnown RBP12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 PCOLCEQ15113 449 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 MFSD4BQ5TF39 518 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 VN1R4Q7Z5H5 301 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 GALNT7Q86SF2 657 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 ASPGQ86U10 573 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 ZC3H7AQ8IWR0 971 aaKnown RBP12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 CNTN4Q8IWV2 1026 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 SIRT6Q8N6T7 355 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 BCORP1Q8N888 145 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 OR51Q1Q8NH59 317 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 SLC13A3Q8WWT9 602 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 TM4SF19Q96DZ7 209 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 LINGO1Q96FE5 620 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 CERS2Q96G23 380 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 RUNDC3BQ96NL0 473 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 CYTH2Q99418 400 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 HAUS8Q9BT25 410 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.73□□□□□ -0.371e-14■□□□□ 10.1
CTDSP1-208ENST00000482272 ARL15Q9NXU5 204 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 PLA2G3Q9NZ20 509 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 STMN3Q9NZ72 180 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 C19orf25Q9UFG5 118 aaPredicted RBP12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 TEKT2Q9UIF3 430 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 IKZF3Q9UKT9 509 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 VWA7Q9Y334 891 aa12.73□□□□□ -0.37
CTDSP1-208ENST00000482272 CPAMD8Q8IZJ3 1885 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 FEZF1A0PJY2 475 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 LCMT2O60294 686 aaKnown RBP12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 TSPAN12O95859 305 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 SLC35G6P0C7Q6 338 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 NPPBP16860 134 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 BCL6P41182 706 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 TNFSF10P50591 281 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 AP1S2P56377 157 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 MORF4L2Q15014 288 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 MINDY4Q4G0A6 757 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 HP1BP3Q5SSJ5 553 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 TEDDM1Q5T9Z0 273 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 HECTD2Q5U5R9 776 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 ABHD17BQ5VST6 288 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 DUPD1Q68J44 220 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 TMEM214Q6NUQ4 689 aaKnown RBP12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 TRMT10BQ6PF06 316 aaKnown RBP12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 SYDE1Q6ZW31 735 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 PRSS41Q7RTY9 318 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 CPEB2Q7Z5Q1 589 aaKnown RBP12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 SLC26A11Q86WA9 606 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 TBC1D19Q8N5T2 526 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 GPATCH11Q8N954 259 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 SUN3Q8TAQ9 357 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 ATL1Q8WXF7 558 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 MAGEB10Q96LZ2 347 aaPredicted RBP12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 MACROD1Q9BQ69 325 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 TRIM51Q9BSJ1 452 aa12.72□□□□□ -0.37
CTDSP1-208ENST00000482272 SGPP1Q9BX95 441 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms