RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 NOS3P29474 1203 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 GRIA2P42262 883 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 MAGEA3P43357 314 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 LAPTM4AQ15012 233 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 ANKDD1AQ495B1 522 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 GPR153Q6NV75 609 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 EIF3MQ7L2H7 374 aaKnown RBP10.96□□□□□ -0.65
SMPD4-218ENST00000482171 SLC34A3Q8N130 599 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 OTUB2Q96DC9 234 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 ZNF347Q96SE7 839 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 TESMINQ9Y4I5 508 aa10.96□□□□□ -0.65
SMPD4-218ENST00000482171 ARID1BQ8NFD5 2236 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-218ENST00000482171 ANKRD33BA6NCL7 494 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 DYRK3O43781 588 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 PRKD3O94806 890 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 DIRAS1O95057 198 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 RB1P06400 928 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 RXRGP48443 463 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 ARCN1P48444 511 aaKnown RBP10.96□□□□□ -0.66
SMPD4-218ENST00000482171 CD97P48960 835 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 HNMTP50135 292 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 ARSFP54793 590 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 RPS13P62277 151 aaKnown RBP10.96□□□□□ -0.66
SMPD4-218ENST00000482171 COX10Q12887 443 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 SLC13A2Q13183 592 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 ABRAXAS2Q15018 415 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 ZDHHC21Q8IVQ6 265 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 KRTCAP2Q8N6L1 136 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 C11orf65Q8NCR3 313 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 TRUB1Q8WWH5 349 aaKnown RBP10.96□□□□□ -0.66
SMPD4-218ENST00000482171 SLC9A6Q92581 669 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 COPS4Q9BT78 406 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 SAMD4AQ9UPU9 718 aaKnown RBP10.96□□□□□ -0.66
SMPD4-218ENST00000482171 MRPS7Q9Y2R9 242 aaKnown RBP10.96□□□□□ -0.66
SMPD4-218ENST00000482171 LYVE1Q9Y5Y7 322 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF780BQ9Y6R6 833 aa10.96□□□□□ -0.66
SMPD4-218ENST00000482171 HMX2A2RU54 273 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 PCP4L1A6NKN8 68 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 A8MV72 311 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 H3BMQ9 156 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 BTN3A3O00478 584 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 IFI30P13284 250 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 MAGEA10P43363 369 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 TRIM71Q2Q1W2 868 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 PDE12Q6L8Q7 609 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 MZT2BQ6NZ67 158 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 RFLNAQ6ZTI6 216 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 NEK10Q6ZWH5 1172 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ERN2Q76MJ5 926 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 DEFB119Q8N690 84 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 GLB1L3Q8NCI6 653 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 CD200R1Q8TD46 325 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 MYEOVQ96EZ4 313 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 COG8Q96MW5 612 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 GAS2L1Q99501 681 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 SERHL2Q9H4I8 314 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 POPDC3Q9HBV1 291 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ARNT2Q9HBZ2 717 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 SERHLQ9NQF3 203 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 CCM2LQ9NUG4 571 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 CXXC1Q9P0U4 656 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 SEC14L3Q9UDX4 400 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 SHROOM3Q8TF72 1996 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 SNTNA6NMZ2 147 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 PSIP1O75475 530 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 HNRNPA1P09651 372 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 GSTT2P0CG29 244 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 GSTT2BP0CG30 244 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ADRA1AP35348 466 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 FCHO2Q0JRZ9 810 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 LRRC32Q14392 662 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 GRIN2CQ14957 1233 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ITPRIPL2Q3MIP1 535 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF544Q6NX49 715 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 PGM2L1Q6PCE3 622 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 EPHX4Q8IUS5 362 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 DEPDC4Q8N2C3 294 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 CLIP4Q8N3C7 705 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 UXS1Q8NBZ7 420 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 WDR36Q8NI36 951 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 ZNF382Q96SR6 550 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 YIPF4Q9BSR8 244 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 BRINP2Q9C0B6 783 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 NKX2-4Q9H2Z4 354 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 RPF2Q9H7B2 306 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 CLN6Q9NWW5 311 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 FAM240BA0A1B0GVZ2 78 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 CLIC1O00299 241 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 TPST2O60704 377 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 TMBIM6P55061 237 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 DCDC5Q6ZRR9 648 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 LRRC70Q7Z2Q7 622 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 MINDY2Q8NBR6 621 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 OR4K1Q8NGD4 311 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 FAM110BQ8TC76 370 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 JPH3Q8WXH2 748 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 GFM1Q96RP9 751 aaKnown RBP10.95□□□□□ -0.66
SMPD4-218ENST00000482171 SRMSQ9H3Y6 488 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 FZD3Q9NPG1 666 aa10.95□□□□□ -0.66
SMPD4-218ENST00000482171 RIMS3Q9UJD0 308 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms