RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 CLIP3Q96DZ5 547 aa12.88□□□□□ -0.35
SNRNP200-204ENST00000480615 OR2A5Q96R48 311 aa12.88□□□□□ -0.35
SNRNP200-204ENST00000480615 CAPS2Q9BXY5 557 aa12.88□□□□□ -0.35
SNRNP200-204ENST00000480615 CHRNA10Q9GZZ6 450 aa12.88□□□□□ -0.35
SNRNP200-204ENST00000480615 CCDC86Q9H6F5 360 aaKnown RBP12.88□□□□□ -0.35
SNRNP200-204ENST00000480615 PELI2Q9HAT8 420 aa12.88□□□□□ -0.35
SNRNP200-204ENST00000480615 GPRC5BQ9NZH0 403 aa12.88□□□□□ -0.35
SNRNP200-204ENST00000480615 LAMA5O15230 3695 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 IGF2RP11717 2491 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 WDR91A4D1P6 747 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 OR7A17O14581 309 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 NVLO15381 856 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 P2RX6O15547 441 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 RPS17P08708 135 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 MSL3P1P0C860 447 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 IMPDH1P20839 514 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 CCR10P46092 362 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 SERPINB4P48594 390 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 CCNG1P51959 295 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 NAGLUP54802 743 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 REEP5Q00765 189 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 TBC1D25Q3MII6 688 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 UNC50Q53HI1 259 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 C1orf189Q5VU69 101 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 ADNP2Q6IQ32 1131 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 DTWD1Q8N5C7 304 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 METTL27Q8N6F8 245 aaPredicted RBP12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 SLC38A9Q8NBW4 561 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 GALNT6Q8NCL4 622 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 CCT6BQ92526 530 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 PTCD3Q96EY7 689 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 TEFMQ96QE5 360 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 ACTR5Q9H9F9 607 aaPredicted RBP12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 ZBTB26Q9HCK0 441 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 DHCR7Q9UBM7 475 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 NDOR1Q9UHB4 597 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 PCDHGA3Q9Y5H0 932 aa12.87□□□□□ -0.35
SNRNP200-204ENST00000480615 A0A1B0GTL3 188 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 TRBC2A0A5B9 178 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 NDUFS4O43181 175 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 DXOO77932 396 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 PCNAP12004 261 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 ALAS2P22557 587 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 ALDH3A1P30838 453 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 HNF4AP41235 474 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 PIK3CGP48736 1102 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 TGIF1Q15583 401 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 CPSF6Q16630 551 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 CFAP157Q5JU67 520 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 HHATQ5VTY9 493 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 LIPMQ5VYY2 423 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 UNQ6494/PRO21346Q6UXR6 183 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 TMIGD1Q6UXZ0 262 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 ZCCHC23Q6ZST2 131 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 TTLL10Q6ZVT0 673 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 VN1R4Q7Z5H5 301 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.86□□□□□ -0.356e-11■■■■■ 114.6
SNRNP200-204ENST00000480615 KRT78Q8N1N4 520 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 TBC1D19Q8N5T2 526 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 ANKRD53Q8N9V6 530 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 OR8K5Q8NH50 307 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 ZNF483Q8TF39 744 aaPredicted RBP12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 CCDC126Q96EE4 140 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 ZNF578Q96N58 590 aaPredicted RBP12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 ZPBPQ9BS86 351 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 NDC1Q9BTX1 674 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 SHCBP1LQ9BZQ2 653 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 OXSMQ9NWU1 459 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 RUVBL1Q9Y265 456 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 RNF11Q9Y3C5 154 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 PCDHGA7Q9Y5G6 932 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 CFAP47Q6ZTR5 3102 aa12.86□□□□□ -0.35
SNRNP200-204ENST00000480615 SCN3AQ9NY46 2000 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 H3BMH7 237 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 STMND1H3BQB6 276 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 FFAR3O14843 346 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 GPR42O15529 346 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 SRPX2O60687 465 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 CPNE3O75131 537 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 SH3BGRLO75368 114 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 WFS1O76024 890 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 BPGMP07738 259 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 DHRS4L1P0CG22 281 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 ATP1A2P50993 1020 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 WDR4P57081 412 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 ERVPABLB-1P60509 514 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 CLCQ05315 142 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 DDX39BQ13838 428 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 SLC9A5Q14940 896 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 TCTE1Q5JU00 501 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 BPHLQ86WA6 291 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 MFSD9Q8NBP5 474 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 ZCCHC10Q8TBK6 192 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 SLC13A3Q8WWT9 602 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 L3HYPDHQ96EM0 354 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 TMEM121BQ9BXQ6 578 aaPredicted RBP12.85□□□□□ -0.35
SNRNP200-204ENST00000480615 TXLNGQ9NUQ3 528 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms