RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 BAIAP2L1Q9UHR4 511 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 SCOCQ9UIL1 159 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 CROTQ9UKG9 612 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 PNMA8BQ9ULN7 279 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 PRSS21Q9Y6M0 314 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 COLEC10Q9Y6Z7 277 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 X6R8D5 127 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 MUC6Q6W4X9 2439 aa6.01□□□□□ -1.45
SF3B1-209ENST00000479532 COL5A1P20908 1838 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-209ENST00000479532 IQANK1A0A1B0GTG1 560 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 DPPA5A6NC42 116 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 RHPN2P1A8MT19 583 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 IQCF5A8MTL0 148 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 POC1B-GALNT4F8VUJ3 575 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 EIF3FO00303 357 aaPredicted RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 SLC30A4O14863 429 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 LSM1O15116 133 aaKnown RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 TPD52L2O43399 206 aaKnown RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 TNFSF14O43557 240 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 SH3BP5O60239 455 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 NIPSNAP2O75323 286 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 SKAP2O75563 359 aaPredicted RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 KRT37O76014 449 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 VIPP01282 170 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 MED14OSP0DP75 135 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 CDK4P11802 303 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 ENO3P13929 434 aaPredicted RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 CD59P13987 128 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 NQO1P15559 274 aaKnown RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 SAT1P21673 171 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 CD9P21926 228 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 ATP5DP30049 168 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 CCR7P32248 378 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 LSSP48449 732 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 LIMK2P53671 638 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 OCRLQ01968 901 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 MVKQ03426 396 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 HSPA14Q0VDF9 509 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 USP10Q14694 798 aaKnown RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 TAF11Q15544 211 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 GPR19Q15760 415 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 CCDC153Q494R4 210 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 FAM153CQ494X1 144 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 C14orf28Q4W4Y0 310 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 CTSL3PQ5NE16 218 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 MROH9Q5TGP6 573 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 HECTD2Q5U5R9 776 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 METRNLQ641Q3 311 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 OR52E8Q6IFG1 317 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 CNSTQ6PJW8 725 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 ABRAXAS1Q6UWZ7 409 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 NCCRP1Q6ZVX7 275 aaPredicted RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 RAPH1Q70E73 1250 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 KANSL1Q7Z3B3 1105 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 PIGWQ7Z7B1 504 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 C11orf96Q7Z7L8 435 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 ZC3HC1Q86WB0 502 aaKnown RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 NRROSQ86YC3 692 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 MYO1HQ8N1T3 1032 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 SLC25A45Q8N413 288 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 NKAPQ8N5F7 415 aaKnown RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 CCL4L1Q8NHW4 92 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 AGAP11Q8TF27 550 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 INPP5DQ92835 1189 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 MTBPQ96DY7 904 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 ATXN7L3BQ96GX2 97 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 C12orf66Q96MD2 445 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 TSNARE1Q96NA8 513 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 BIRC8Q96P09 236 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 TMEM237Q96Q45 408 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 RBBP8Q99708 897 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 RTKNQ9BST9 563 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 LDHAL6BQ9BYZ2 381 aaPredicted RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 WWP1Q9H0M0 922 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 PLAC1Q9HBJ0 212 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 POPDC3Q9HBV1 291 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 TMBIM4Q9HC24 238 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 SMURF1Q9HCE7 757 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 SYTL2Q9HCH5 934 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 EMC7Q9NPA0 242 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 RXFP3Q9NSD7 469 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 POT1Q9NUX5 634 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 H2AFY2Q9P0M6 372 aaPredicted RBP6□□□□□ -1.45
SF3B1-209ENST00000479532 TBC1D29Q9UFV1 150 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 SLC23A2Q9UGH3 650 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 FETUBQ9UGM5 382 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 SLC24A2Q9UI40 661 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 VWA7Q9Y334 891 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 DHRS7Q9Y394 339 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 PLEKHM1Q9Y4G2 1056 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 WDFY4Q6ZS81 3184 aa6□□□□□ -1.45
SF3B1-209ENST00000479532 SMIM31A0A1B0GVY4 71 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SLC5A10A0PJK1 596 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CPED1A4D0V7 1026 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 FITM1A5D6W6 292 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 MAGEA13PA6NCF6 341 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 NOTOA8MTQ0 251 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CXorf49A8MYA2 514 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SGTAO43765 313 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 NUDT21O43809 227 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms