RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 COPEO14579 308 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 LCMT2O60294 686 aaKnown RBP25.57■■□□□ 1.68
CCM2-211ENST00000478582 TAC1P20366 129 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 RORAP35398 523 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 CASP2P42575 452 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 ARSFP54793 590 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 NFKB2Q00653 900 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 REEP5Q00765 189 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 PCSK4Q6UW60 755 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 C4orf33Q8N1A6 199 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 TBC1D19Q8N5T2 526 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 IL22RA1Q8N6P7 574 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 MFSD9Q8NBP5 474 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 TTC9Q92623 222 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 RERGQ96A58 199 aaPredicted RBP25.57■■□□□ 1.68
CCM2-211ENST00000478582 TM4SF19Q96DZ7 209 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 PHF21BQ96EK2 531 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 AIF1LQ9BQI0 150 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 NDC1Q9BTX1 674 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 PITHD1Q9GZP4 211 aaPredicted RBP25.57■■□□□ 1.68
CCM2-211ENST00000478582 IRAK4Q9NWZ3 460 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 COPG2Q9UBF2 871 aa25.57■■□□□ 1.68
CCM2-211ENST00000478582 FEZF1A0PJY2 475 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 A8MT66 165 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 H2AFYO75367 372 aaKnown RBP25.56■■□□□ 1.68
CCM2-211ENST00000478582 EPB42P16452 691 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 CXCR2P25025 360 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 BCL6P41182 706 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 MEF2AQ02078 507 aaPredicted RBP25.56■■□□□ 1.68
CCM2-211ENST00000478582 ABHD18Q0P651 414 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 GPS2Q13227 327 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 TBCCQ15814 346 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 FAM214AQ32MH5 1076 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 CCDC153Q494R4 210 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 CEP85LQ5SZL2 805 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 ZNF517Q6ZMY9 492 aaPredicted RBP25.56■■□□□ 1.68
CCM2-211ENST00000478582 VN1R4Q7Z5H5 301 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 BANPQ8N9N5 519 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 TTC29Q8NA56 475 aaPredicted RBP25.56■■□□□ 1.68
CCM2-211ENST00000478582 ZSCAN1Q8NBB4 408 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 CLIP3Q96DZ5 547 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 SPNS1Q9H2V7 528 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 NT5DC2Q9H857 520 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 SENP1Q9P0U3 644 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 PADI1Q9ULC6 663 aa25.56■■□□□ 1.68
CCM2-211ENST00000478582 LRRC14BA6NHZ5 514 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 E2F3O00716 465 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 RGS16O15492 202 aaPredicted RBP25.55■■□□□ 1.68
CCM2-211ENST00000478582 PRAMEF4O60810 478 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 SIX3O95343 332 aaPredicted RBP25.55■■□□□ 1.68
CCM2-211ENST00000478582 CCNYL3P0C7X3 344 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 VARSP26640 1264 aaKnown RBP25.55■■□□□ 1.68
CCM2-211ENST00000478582 SCTRP47872 440 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 PIK3CGP48736 1102 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 TNFAIP8L3Q5GJ75 292 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 PRAMEF9Q5VWM5 478 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 SRRM1Q8IYB3 904 aaKnown RBP25.55■■□□□ 1.68
CCM2-211ENST00000478582 DSELQ8IZU8 1212 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 TEX9Q8N6V9 391 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 CSNK1A1LQ8N752 337 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 ZNF740Q8NDX6 193 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 PROKR1Q8TCW9 393 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 RNF31Q96EP0 1072 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 PTCD3Q96EY7 689 aaKnown RBP25.55■■□□□ 1.68
CCM2-211ENST00000478582 DPH2Q9BQC3 489 aaPredicted RBP25.55■■□□□ 1.68
CCM2-211ENST00000478582 C1QTNF3Q9BXJ4 246 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 SLC7A5P2Q9GIP4 190 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 LHX9Q9NQ69 397 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 STARD5Q9NSY2 213 aa25.55■■□□□ 1.68
CCM2-211ENST00000478582 GEMIN8Q9NWZ8 242 aaKnown RBP25.55■■□□□ 1.68
CCM2-211ENST00000478582 HYKKA2RU49 373 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 MEN1O00255 615 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 OR1F1O43749 312 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 DLX3O60479 287 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 PLIN3O60664 434 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 WFS1O76024 890 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 PROCP04070 461 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 EIF2S1P05198 315 aaKnown RBP25.54■■□□□ 1.68
CCM2-211ENST00000478582 KLK3P07288 261 aaPredicted RBP25.54■■□□□ 1.68
CCM2-211ENST00000478582 H2AFXP16104 143 aaPredicted RBP25.54■■□□□ 1.68
CCM2-211ENST00000478582 WT1P19544 449 aaPredicted RBP25.54■■□□□ 1.68
CCM2-211ENST00000478582 ATP5F1P24539 256 aaPredicted RBP25.54■■□□□ 1.68
CCM2-211ENST00000478582 EEF1DP29692 281 aaKnown RBP25.54■■□□□ 1.68
CCM2-211ENST00000478582 AHRP35869 848 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 ZNF385CQ66K41 422 aaPredicted RBP25.54■■□□□ 1.68
CCM2-211ENST00000478582 ARHGEF39Q8N4T4 335 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 PGM2Q96G03 612 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 APOPT1Q96IL0 206 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 EFCAB11Q9BUY7 163 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 CUTCQ9NTM9 273 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 ARGLU1Q9NWB6 273 aaPredicted RBP25.54■■□□□ 1.68
CCM2-211ENST00000478582 ANGPTL3Q9Y5C1 460 aa25.54■■□□□ 1.68
CCM2-211ENST00000478582 KATNA1O75449 491 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 STAT5AP42229 794 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 IRF8Q02556 426 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 CHIT1Q13231 466 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 LAPTM5Q13571 262 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 GTF2H2Q13888 395 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 DOC2AQ14183 400 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 CASP8Q14790 479 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms