RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 IKZF3Q9UKT9 509 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CLCA2Q9UQC9 943 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 EIF3LQ9Y262 564 aaKnown RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 TDRKHQ9Y2W6 561 aaKnown RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 DNAJC15Q9Y5T4 150 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 MGAQ8IWI9 3026 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 MYO18BQ8IUG5 2567 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 PIPSLA2A3N6 862 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 URADA6NGE7 173 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 TXNDC9O14530 226 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 UBFD1O14562 309 aaKnown RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 OR7A17O14581 309 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 AQP9O43315 295 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 LYPLA1O75608 230 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 RSL1D1O76021 490 aaKnown RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 WNT1P04628 370 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CAPN1P07384 714 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CHRNGP07510 517 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 PRPS2P11908 318 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 IDO1P14902 403 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 PNLIPP16233 465 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 NCF2P19878 526 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CALB2P22676 271 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 PRPH2P23942 346 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 ACP1P24666 158 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 EPHA8P29322 1005 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 GDF5P43026 501 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 GPR3P46089 330 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 FASLGP48023 281 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 AGTR2P50052 363 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 TMPRSS3P57727 454 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 ERVPABLB-1P60509 514 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 STX1BP61266 288 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 EMX2Q04743 252 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 TGM3Q08188 693 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 LRRC74AQ0VAA2 488 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 BNIP3Q12983 259 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CSTF3Q12996 717 aaKnown RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CLPPQ16740 277 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 IMPG1Q17R60 797 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 ATP6AP1LQ52LC2 224 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 LACTB2Q53H82 288 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CACHD1Q5VU97 1274 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 PRAMEF13Q5VWM6 474 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 FRG2Q64ET8 278 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 NXNQ6DKJ4 435 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 GRHL2Q6ISB3 625 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 NIPAL1Q6NVV3 410 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 PCSK4Q6UW60 755 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CHSY3Q70JA7 882 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 SYVN1Q86TM6 617 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 MTDHQ86UE4 582 aaKnown RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 LRRC56Q8IYG6 542 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 C10orf67Q8IYJ2 551 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 SFRP1Q8N474 314 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 NATD1Q8N6N6 113 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 DCBLD1Q8N8Z6 715 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 LMNTD1Q8N9Z9 388 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 C7orf57Q8NEG2 295 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 ABHD11Q8NFV4 315 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 OR4F6Q8NGB9 312 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 OR4K1Q8NGD4 311 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 RFWD2Q8NHY2 731 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 RP9Q8TA86 221 aaKnown RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 TWIST2Q8WVJ9 160 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 SLC5A11Q8WWX8 675 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 USP7Q93009 1102 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 TUBGCP3Q96CW5 907 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 C19orf60Q96EN9 201 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CCDC97Q96F63 343 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 RMDN2Q96LZ7 410 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 ZNF578Q96N58 590 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 FRG2BQ96QU4 278 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 SERPINI1Q99574 410 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 MYOCQ99972 504 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 DPYSL5Q9BPU6 564 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 TMEM79Q9BSE2 394 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 SARGQ9BW04 601 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 NUF2Q9BZD4 464 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 ATG10Q9H0Y0 220 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 MMADHCQ9H3L0 296 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CLMPQ9H6B4 373 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 ZNF395Q9H8N7 513 aaPredicted RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 SLC40A1Q9NP59 571 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 MRPL40Q9NQ50 206 aaKnown RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 IMP3Q9NV31 184 aaKnown RBP6.76□□□□□ -1.33
SHQ1-207ENST00000475558 SIRT5Q9NXA8 310 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 CPNE7Q9UBL6 633 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 FAM8A1Q9UBU6 413 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 PSMD13Q9UNM6 376 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 KCNK6Q9Y257 313 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 PRKAB1Q9Y478 270 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 PLXNA2O75051 1894 aa6.76□□□□□ -1.33
SHQ1-207ENST00000475558 TENM4Q6N022 2769 aa6.75□□□□□ -1.33
SHQ1-207ENST00000475558 A6NCN8 305 aa6.75□□□□□ -1.33
SHQ1-207ENST00000475558 ANKDD1BA6NHY2 528 aa6.75□□□□□ -1.33
SHQ1-207ENST00000475558 C2orf74A8MZ97 194 aa6.75□□□□□ -1.33
SHQ1-207ENST00000475558 B8ZZF3 427 aa6.75□□□□□ -1.33
SHQ1-207ENST00000475558 MANBAO00462 879 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms