RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ART1P52961 327 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 PNLIPRP1P54315 467 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 YBX1P67809 324 aaKnown RBP11.88□□□□□ -0.51
SKA3-206ENST00000475251 ACTN3Q08043 901 aaPredicted RBP11.88□□□□□ -0.51
SKA3-206ENST00000475251 KLF1Q13351 362 aaPredicted RBP11.88□□□□□ -0.51
SKA3-206ENST00000475251 PCID2Q5JVF3 399 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 TMEM211Q6ICI0 200 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 MRNIPQ6NTE8 343 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 LANCL3Q6ZV70 420 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.88□□□□□ -0.51
SKA3-206ENST00000475251 PCGF5Q86SE9 256 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
SKA3-206ENST00000475251 OTUD6BQ8N6M0 293 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 POGLUT1Q8NBL1 392 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 OR51Q1Q8NH59 317 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 ASB5Q8WWX0 329 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 OLFM1Q99784 485 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 HES7Q9BYE0 225 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 MARCH4Q9P2E8 410 aaPredicted RBP11.88□□□□□ -0.51
SKA3-206ENST00000475251 AMFRQ9UKV5 643 aa11.88□□□□□ -0.51
SKA3-206ENST00000475251 SCN2AQ99250 2005 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 FAM221AA4D161 298 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 ARHGEF33A8MVX0 844 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 BTNL10A8MVZ5 291 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 MIF4GDA9UHW6 222 aaKnown RBP11.87□□□□□ -0.51
SKA3-206ENST00000475251 DIAPH2O60879 1101 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
SKA3-206ENST00000475251 NADKO95544 446 aaPredicted RBP11.87□□□□□ -0.51
SKA3-206ENST00000475251 ESR1P03372 595 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 EFNA3P52797 238 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 MAPKAPK3Q16644 382 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.87□□□□□ -0.51
SKA3-206ENST00000475251 THEMIS2Q5TEJ8 643 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 PAPD4Q6PIY7 484 aaKnown RBP11.87□□□□□ -0.51
SKA3-206ENST00000475251 NCCRP1Q6ZVX7 275 aaPredicted RBP11.87□□□□□ -0.51
SKA3-206ENST00000475251 ANKRD37Q7Z713 158 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 SYCE1Q8N0S2 351 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 CHDHQ8NE62 594 aaPredicted RBP11.87□□□□□ -0.51
SKA3-206ENST00000475251 OR9A4Q8NGU2 314 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 TMEM125Q96AQ2 219 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 FRMD8P1Q9BZ68 369 aaPredicted RBP11.87□□□□□ -0.51
SKA3-206ENST00000475251 ANKHQ9HCJ1 492 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 CHRAC1Q9NRG0 131 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 R3HDM2Q9Y2K5 976 aaKnown RBP11.87□□□□□ -0.51
SKA3-206ENST00000475251 NF1P21359 2839 aa11.87□□□□□ -0.51
SKA3-206ENST00000475251 E5RI56 91 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 SMAPO00193 183 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 HAT1O14929 419 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 P2RX6O15547 441 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 NME2P1O60361 137 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 SLC25A12O75746 678 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 NEURL1O76050 574 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 IFNB1P01574 187 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 APRTP07741 180 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 CD99P14209 185 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 IGFBP2P18065 325 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 CHRM3P20309 590 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 NME2P22392 152 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 BCL6P41182 706 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 GRIA1P42261 906 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 CYB561P49447 251 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 ADARP55265 1226 aaKnown RBP11.86□□□□□ -0.51
SKA3-206ENST00000475251 RPS15AP62244 130 aaKnown RBP11.86□□□□□ -0.51
SKA3-206ENST00000475251 TBX2Q13207 712 aaPredicted RBP11.86□□□□□ -0.51
SKA3-206ENST00000475251 GBX1Q14549 363 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 TTLL9Q3SXZ7 439 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 SFT2D3Q587I9 215 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 CTSL3PQ5NE16 218 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 CES4AQ5XG92 561 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 PEX26Q7Z412 305 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 TMEM200AQ86VY9 491 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 TC2NQ8N9U0 490 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 CAMKVQ8NCB2 501 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 FBXO15Q8NCQ5 510 aaPredicted RBP11.86□□□□□ -0.51
SKA3-206ENST00000475251 FAM57AQ8TBR7 257 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 THAP11Q96EK4 314 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 OR1F2PQ96R84 312 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 TCF12Q99081 682 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 PKP4Q99569 1192 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 ZNF559Q9BR84 538 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 FAM129AQ9BZQ8 928 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 IL22Q9GZX6 179 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 SYNPO2LQ9H987 977 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 RAB6BQ9NRW1 208 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 TREX1Q9NSU2 369 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 TNFRSF10DQ9UBN6 386 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 TSR3Q9UJK0 312 aaKnown RBP11.86□□□□□ -0.51
SKA3-206ENST00000475251 VPS9D1Q9Y2B5 631 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 ASB1Q9Y576 335 aa11.86□□□□□ -0.51
SKA3-206ENST00000475251 KCNE1BA0A087WTH5 132 aa11.85□□□□□ -0.51
SKA3-206ENST00000475251 USP27XA6NNY8 438 aa11.85□□□□□ -0.51
SKA3-206ENST00000475251 E7ENX8 843 aa11.85□□□□□ -0.51
SKA3-206ENST00000475251 KLRC4-KLRK1H3BQV0 150 aa11.85□□□□□ -0.51
SKA3-206ENST00000475251 ADAM10O14672 748 aa11.85□□□□□ -0.51
SKA3-206ENST00000475251 NDC80O14777 642 aa11.85□□□□□ -0.51
SKA3-206ENST00000475251 TFECO14948 347 aaPredicted RBP11.85□□□□□ -0.51
SKA3-206ENST00000475251 SLC16A8O95907 504 aa11.85□□□□□ -0.51
SKA3-206ENST00000475251 TPOP07202 933 aa11.85□□□□□ -0.51
SKA3-206ENST00000475251 CHRNB4P30926 498 aa11.85□□□□□ -0.51
SKA3-206ENST00000475251 FMO4P31512 558 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms