RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ATP6V0D1P61421 351 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 RBBP7Q16576 425 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 CATSPEREQ5SY80 951 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 CMC1Q7Z7K0 106 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 ARHGEF39Q8N4T4 335 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 TBC1D19Q8N5T2 526 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 CEP112Q8N8E3 955 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 MFSD9Q8NBP5 474 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 CLEC1AQ8NC01 280 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 NEIL2Q969S2 332 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 FMO2Q99518 471 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 SLC22A14Q9Y267 594 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 MRPS2Q9Y399 296 aaKnown RBP22.84■■□□□ 1.25
CPNE1-223ENST00000475146 MED13Q9UHV7 2174 aa22.84■■□□□ 1.25
CPNE1-223ENST00000475146 ZNF462Q96JM2 2506 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 J3QKU1 62 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 FOXS1O43638 330 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 OR1F1O43749 312 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 LCMT2O60294 686 aaKnown RBP22.83■■□□□ 1.25
CPNE1-223ENST00000475146 PDGFAP04085 211 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 ZGLP1P0C6A0 271 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 CD1DP15813 335 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 AVPR1BP47901 424 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 KLC1Q07866 573 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 FAM53BQ14153 422 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 UAP1Q16222 522 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-223ENST00000475146 VWA2Q5GFL6 755 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 DCAF10Q5QP82 559 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 TMPRSS11BQ86T26 416 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 GPSM1Q86YR5 675 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 FDCSPQ8NFU4 85 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 ZCCHC10Q8TBK6 192 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 SLC13A3Q8WWT9 602 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 TSPYL1Q9H0U9 437 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 SEMA3GQ9NS98 782 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 WWOXQ9NZC7 414 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 ANAPC2Q9UJX6 822 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 KCNE2Q9Y6J6 123 aa22.83■■□□□ 1.25
CPNE1-223ENST00000475146 AGPSO00116 658 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 WDR47O94967 919 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 SLC35G6P0C7Q6 338 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 GMPRP36959 345 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 KLRB1Q12918 225 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 RAPSNQ13702 412 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 TGFBIQ15582 683 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 C18orf21Q32NC0 220 aaPredicted RBP22.82■■□□□ 1.24
CPNE1-223ENST00000475146 COLEC12Q5KU26 742 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 AMER3Q8N944 861 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 TEX19Q8NA77 164 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 OR4K1Q8NGD4 311 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 EXT2Q93063 718 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 NACC2Q96BF6 587 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 RHBDF1Q96CC6 855 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 CYTH2Q99418 400 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 TRIM4Q9C037 500 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 CDC42EP4Q9H3Q1 356 aaKnown RBP22.82■■□□□ 1.24
CPNE1-223ENST00000475146 GPR83Q9NYM4 423 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 C3orf18Q9UK00 162 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 FBXL4Q9UKA2 621 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 HS3ST3B1Q9Y662 390 aa22.82■■□□□ 1.24
CPNE1-223ENST00000475146 IGLV3-12A0A075B6K2 115 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 TRBC2A0A5B9 178 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 PYCARD-AS1I3L0S3 204 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 MASP2O00187 686 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 CEACAM4O75871 244 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 ACSL3O95573 720 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 IL1RNP18510 177 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 CRABP2P29373 138 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 SLC26A3P40879 764 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 MAT1AQ00266 395 aaKnown RBP22.81■■□□□ 1.24
CPNE1-223ENST00000475146 BMPR2Q13873 1038 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 OR4D1Q15615 310 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 SYT16Q17RD7 645 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 UBAP2Q5T6F2 1119 aaKnown RBP22.81■■□□□ 1.24
CPNE1-223ENST00000475146 TMEM214Q6NUQ4 689 aaKnown RBP22.81■■□□□ 1.24
CPNE1-223ENST00000475146 TBC1D1Q86TI0 1168 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-223ENST00000475146 RELL1Q8IUW5 271 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 TCAIMQ8N3R3 496 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 OR9A4Q8NGU2 314 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 NUDT9Q9BW91 350 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 PELI2Q9HAT8 420 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 MKKSQ9NPJ1 570 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-223ENST00000475146 C14orf105Q9NVL8 296 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 MAP4K5Q9Y4K4 846 aa22.81■■□□□ 1.24
CPNE1-223ENST00000475146 SOCS6O14544 535 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 NDUFS4O43181 175 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 S100BP04271 92 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-223ENST00000475146 SERPIND1P05546 499 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 SLC35E2BP0CK96 405 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 GDF5P43026 501 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 SNRPNP63162 240 aaKnown RBP22.8■■□□□ 1.24
CPNE1-223ENST00000475146 REEP5Q00765 189 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 MROH9Q5TGP6 573 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 NXPE4Q6UWF7 544 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 KCT2Q8NC54 265 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 ZNF740Q8NDX6 193 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 KIAA1191Q96A73 305 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 TM4SF19Q96DZ7 209 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 VPS50Q96JG6 964 aa22.8■■□□□ 1.24
CPNE1-223ENST00000475146 UBXN10Q96LJ8 280 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms