RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ITPKBP27987 946 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 GRK3P35626 688 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 PWP1Q13610 501 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 LRIG3Q6UXM1 1119 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 LRRC69Q6ZNQ3 347 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 CSNK1A1LQ8N752 337 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 ANKRD53Q8N9V6 530 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 NT5CQ8TCD5 201 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 PTCD3Q96EY7 689 aaKnown RBP16.15■□□□□ 0.18
SCAF11-206ENST00000474828 SLC45A3Q96JT2 553 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 AIF1LQ9BQI0 150 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 NDC1Q9BTX1 674 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 EFHD1Q9BUP0 239 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 GPR87Q9BY21 358 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 SLC22A11Q9NSA0 550 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 CUTCQ9NTM9 273 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 ABCF3Q9NUQ8 709 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 OPTCQ9UBM4 332 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 ZFP69BQ9UJL9 534 aa16.15■□□□□ 0.18
SCAF11-206ENST00000474828 RUVBL1Q9Y265 456 aaKnown RBP16.15■□□□□ 0.18
SCAF11-206ENST00000474828 A0A1B0GX78 115 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 A8MT66 165 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 GOLGA8RI6L899 631 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 UGDHO60701 494 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 KLK3P07288 261 aaPredicted RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 RPS17P08708 135 aaKnown RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 SPTBP11277 2137 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 GFAPP14136 432 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 LIFP15018 202 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 EPB42P16452 691 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 KRT15P19012 456 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 KRT4P19013 534 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 WT1P19544 449 aaPredicted RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 CD22P20273 847 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 F8A1P23610 371 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 CXCR2P25025 360 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 CCT5P48643 541 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 PIK3CGP48736 1102 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 IFFO1Q0D2I5 559 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 MUM1Q2TAK8 710 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 HKDC1Q2TB90 917 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 FBXO48Q5FWF7 155 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 LCN10Q6JVE6 187 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 TMEM214Q6NUQ4 689 aaKnown RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 MRPL14Q6P1L8 145 aaKnown RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 PRMT9Q6P2P2 845 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 FAM198BQ6UWH4 519 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 ADCK2Q7Z695 626 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 CROCCP2Q86T23 111 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 TMPRSS11BQ86T26 416 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 AFAP1L2Q8N4X5 818 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 PTGR2Q8N8N7 351 aaPredicted RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 BANPQ8N9N5 519 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 TTC29Q8NA56 475 aaPredicted RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 CREB3L4Q8TEY5 395 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 EXT2Q93063 718 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 RERGQ96A58 199 aaPredicted RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 EFCAB11Q9BUY7 163 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 NLNQ9BYT8 704 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 SLC26A1Q9H2B4 701 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 RHBGQ9H310 441 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 CPSF2Q9P2I0 782 aaKnown RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 PCTPQ9UKL6 214 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 GRID1Q9ULK0 1009 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 ZNF490Q9ULM2 529 aaPredicted RBP16.14■□□□□ 0.17
SCAF11-206ENST00000474828 SLC22A7Q9Y694 548 aa16.14■□□□□ 0.17
SCAF11-206ENST00000474828 FEZF1A0PJY2 475 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 G3V2L1 256 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 K7ENP7 123 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 CLGNO14967 610 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 DLX3O60479 287 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 CCNT2O60583 730 aaKnown RBP16.13■□□□□ 0.17
SCAF11-206ENST00000474828 PLIN3O60664 434 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 SMIM24O75264 130 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 SIX3O95343 332 aaPredicted RBP16.13■□□□□ 0.17
SCAF11-206ENST00000474828 TBX6O95947 436 aaPredicted RBP16.13■□□□□ 0.17
SCAF11-206ENST00000474828 PROCP04070 461 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 VARSP26640 1264 aaKnown RBP16.13■□□□□ 0.17
SCAF11-206ENST00000474828 DCDP81605 110 aaKnown RBP16.13■□□□□ 0.17
SCAF11-206ENST00000474828 HYAL2Q12891 473 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 LAPTM5Q13571 262 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 DOC2AQ14183 400 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 CCDC153Q494R4 210 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 INO80CQ6PI98 192 aaPredicted RBP16.13■□□□□ 0.17
SCAF11-206ENST00000474828 TMIGD1Q6UXZ0 262 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 ASPGQ86U10 573 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 LAS2Q8IYD9 372 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 TBC1D19Q8N5T2 526 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 IL22RA1Q8N6P7 574 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 L3MBTL4Q8NA19 623 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 CAMKVQ8NCB2 501 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 MYRIPQ8NFW9 859 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 TTLQ8NG68 377 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 RDH11Q8TC12 318 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 CT55Q8WUE5 264 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 FKBP10Q96AY3 582 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 CLIP3Q96DZ5 547 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 PGM2Q96G03 612 aa16.13■□□□□ 0.17
SCAF11-206ENST00000474828 NAF1Q96HR8 494 aaKnown RBP16.13■□□□□ 0.17
SCAF11-206ENST00000474828 ZIM3Q96PE6 472 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms