RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 CDRT15Q96T59 188 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 SARGQ9BW04 601 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 EBPLQ9BY08 206 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 SRMSQ9H3Y6 488 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 SLC6A20Q9NP91 592 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 MRPS30Q9NP92 439 aaKnown RBP9.01□□□□□ -0.97
VPS52-216ENST00000471309 ABCD2Q9UBJ2 740 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 CPNE7Q9UBL6 633 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 BAIAP2L1Q9UHR4 511 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 TNRC6BQ9UPQ9 1833 aaKnown RBP9.01□□□□□ -0.97
VPS52-216ENST00000471309 C15orf38-AP3S2A0A0A6YYH1 394 aa9□□□□□ -0.97
VPS52-216ENST00000471309 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9□□□□□ -0.97
VPS52-216ENST00000471309 ANKDD1BA6NHY2 528 aa9□□□□□ -0.97
VPS52-216ENST00000471309 H7BY64 318 aa9□□□□□ -0.97
VPS52-216ENST00000471309 BTN3A3O00478 584 aa9□□□□□ -0.97
VPS52-216ENST00000471309 TRIM38O00635 465 aa9□□□□□ -0.97
VPS52-216ENST00000471309 PCDH7O60245 1069 aa9□□□□□ -0.97
VPS52-216ENST00000471309 ENTPD5O75356 428 aa9□□□□□ -0.97
VPS52-216ENST00000471309 CLEC3AO75596 197 aa9□□□□□ -0.97
VPS52-216ENST00000471309 PDGFBP01127 241 aaPredicted RBP9□□□□□ -0.97
VPS52-216ENST00000471309 VIPP01282 170 aa9□□□□□ -0.97
VPS52-216ENST00000471309 PGRP06401 933 aa9□□□□□ -0.97
VPS52-216ENST00000471309 MAOBP27338 520 aa9□□□□□ -0.97
VPS52-216ENST00000471309 GRK3P35626 688 aa9□□□□□ -0.97
VPS52-216ENST00000471309 ASMTP46597 345 aa9□□□□□ -0.97
VPS52-216ENST00000471309 HNRNPFP52597 415 aaKnown RBP9□□□□□ -0.97
VPS52-216ENST00000471309 NFYCQ13952 458 aa9□□□□□ -0.97
VPS52-216ENST00000471309 CEACAM7Q14002 265 aa9□□□□□ -0.97
VPS52-216ENST00000471309 KPNB1Q14974 876 aaKnown RBP9□□□□□ -0.97
VPS52-216ENST00000471309 PLCL1Q15111 1095 aa9□□□□□ -0.97
VPS52-216ENST00000471309 RBBP5Q15291 538 aaKnown RBP9□□□□□ -0.97
VPS52-216ENST00000471309 ELOCQ15369 112 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SF1Q15637 639 aaKnown RBP9□□□□□ -0.97
VPS52-216ENST00000471309 SNCBQ16143 134 aa9□□□□□ -0.97
VPS52-216ENST00000471309 FAM174BQ3ZCQ3 159 aa9□□□□□ -0.97
VPS52-216ENST00000471309 PAGE3Q5JUK9 113 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SPANXN4Q5MJ08 99 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SAMD4BQ5PRF9 694 aaKnown RBP9□□□□□ -0.97
VPS52-216ENST00000471309 C1orf146Q5VVC0 180 aa9□□□□□ -0.97
VPS52-216ENST00000471309 KHDRBS2Q5VWX1 349 aaKnown RBP9□□□□□ -0.97
VPS52-216ENST00000471309 ZNF425Q6IV72 752 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SLC2A7Q6PXP3 512 aa9□□□□□ -0.97
VPS52-216ENST00000471309 MSANTD1Q6ZTZ1 278 aa9□□□□□ -0.97
VPS52-216ENST00000471309 ARMCX6Q7L4S7 300 aa9□□□□□ -0.97
VPS52-216ENST00000471309 ADCK2Q7Z695 626 aa9□□□□□ -0.97
VPS52-216ENST00000471309 ARPINQ7Z6K5 226 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SLC9B2Q86UD5 537 aa9□□□□□ -0.97
VPS52-216ENST00000471309 C11orf74Q86VG3 221 aa9□□□□□ -0.97
VPS52-216ENST00000471309 WDR5BQ86VZ2 330 aa9□□□□□ -0.97
VPS52-216ENST00000471309 GKN2Q86XP6 184 aa9□□□□□ -0.97
VPS52-216ENST00000471309 HPS6Q86YV9 775 aa9□□□□□ -0.97
VPS52-216ENST00000471309 TMEFF1Q8IYR6 380 aa9□□□□□ -0.97
VPS52-216ENST00000471309 NAGSQ8N159 534 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SDR16C5Q8N3Y7 309 aa9□□□□□ -0.97
VPS52-216ENST00000471309 FBXL6Q8N531 539 aa9□□□□□ -0.97
VPS52-216ENST00000471309 TBC1D19Q8N5T2 526 aa9□□□□□ -0.97
VPS52-216ENST00000471309 KRTCAP2Q8N6L1 136 aa9□□□□□ -0.97
VPS52-216ENST00000471309 ANKRD53Q8N9V6 530 aa9□□□□□ -0.97
VPS52-216ENST00000471309 GPR156Q8NFN8 814 aa9□□□□□ -0.97
VPS52-216ENST00000471309 OR4E2Q8NGC2 313 aa9□□□□□ -0.97
VPS52-216ENST00000471309 DNAJB8Q8NHS0 232 aa9□□□□□ -0.97
VPS52-216ENST00000471309 CLHC1Q8NHS4 586 aa9□□□□□ -0.97
VPS52-216ENST00000471309 FLVCR1-AS1Q8TAF5 88 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SLC37A2Q8TED4 501 aa9□□□□□ -0.97
VPS52-216ENST00000471309 PATE1Q8WXA2 126 aa9□□□□□ -0.97
VPS52-216ENST00000471309 JADE3Q92613 823 aa9□□□□□ -0.97
VPS52-216ENST00000471309 EDAQ92838 391 aa9□□□□□ -0.97
VPS52-216ENST00000471309 LRRC58Q96CX6 371 aa9□□□□□ -0.97
VPS52-216ENST00000471309 PRAP1Q96NZ9 151 aa9□□□□□ -0.97
VPS52-216ENST00000471309 TSSK3Q96PN8 268 aa9□□□□□ -0.97
VPS52-216ENST00000471309 MS4A8Q9BY19 250 aa9□□□□□ -0.97
VPS52-216ENST00000471309 MIR1-1HGQ9H1L0 117 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SPHK1Q9NYA1 384 aa9□□□□□ -0.97
VPS52-216ENST00000471309 TMEM181Q9P2C4 612 aa9□□□□□ -0.97
VPS52-216ENST00000471309 ANKMY1Q9P2S6 941 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SPASTQ9UBP0 616 aa9□□□□□ -0.97
VPS52-216ENST00000471309 SUCOQ9UBS9 1254 aaKnown RBP9□□□□□ -0.97
VPS52-216ENST00000471309 MCM8Q9UJA3 840 aa9□□□□□ -0.97
VPS52-216ENST00000471309 POMPQ9Y244 141 aa9□□□□□ -0.97
VPS52-216ENST00000471309 ENTPD2Q9Y5L3 495 aa9□□□□□ -0.97
VPS52-216ENST00000471309 PCM1Q15154 2024 aa9□□□□□ -0.97
VPS52-216ENST00000471309 FEZF1A0PJY2 475 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 ISM1B1AKI9 464 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 NME4O00746 187 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 OR1F1O43749 312 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 FKBP9O95302 570 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 TBX6O95947 436 aaPredicted RBP8.99□□□□□ -0.97
VPS52-216ENST00000471309 TGFB1P01137 390 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 LMNAP02545 664 aaKnown RBP8.99□□□□□ -0.97
VPS52-216ENST00000471309 ANXA4P09525 319 aaPredicted RBP8.99□□□□□ -0.97
VPS52-216ENST00000471309 ME2P23368 584 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 SLC6A2P23975 617 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 AHRP35869 848 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 HPCAL1P37235 193 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 AFF3P51826 1226 aaKnown RBP8.99□□□□□ -0.97
VPS52-216ENST00000471309 SLC7A2P52569 658 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 DGKQP52824 942 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 ZNF763Q0D2J5 394 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 SLC5A12Q1EHB4 618 aa8.99□□□□□ -0.97
VPS52-216ENST00000471309 TMEM35AQ53FP2 167 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms