RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MUTYHQ9UIF7 546 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 SIT1Q9Y3P8 196 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 TSC22D4Q9Y3Q8 395 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 PCDHA9Q9Y5H5 950 aa17.42■□□□□ 0.38
SMC4-211ENST00000469858 IGKV1-8A0A0C4DH67 115 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 GNG14A0A1W2PPG7 69 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 ANKDD1BA6NHY2 528 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 PCDH7O60245 1069 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 FKBP6O75344 327 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 KCNH1O95259 989 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 NPPAP01160 153 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 PRPS1L1P21108 318 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 CD27P26842 260 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 MAOBP27338 520 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 PEBP1P30086 187 aaKnown RBP17.41■□□□□ 0.38
SMC4-211ENST00000469858 S100A3P33764 101 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 AP2B1P63010 937 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 CSNK1G2P78368 415 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 TRIM25Q14258 630 aaKnown RBP17.41■□□□□ 0.38
SMC4-211ENST00000469858 DLEU7Q6UYE1 221 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 COMMD6Q7Z4G1 85 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 PARGQ86W56 976 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 TRIM48Q8IWZ4 208 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 CAMKK1Q8N5S9 505 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 BHLHE22Q8NFJ8 381 aaPredicted RBP17.41■□□□□ 0.38
SMC4-211ENST00000469858 OR4K1Q8NGD4 311 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 PATE1Q8WXA2 126 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 TMEM125Q96AQ2 219 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 TMEM74Q96NL1 305 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 MRPS30Q9NP92 439 aaKnown RBP17.41■□□□□ 0.38
SMC4-211ENST00000469858 TAAR2Q9P1P5 351 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 THEGQ9P2T0 379 aa17.41■□□□□ 0.38
SMC4-211ENST00000469858 ACOT8O14734 319 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 PRICKLE3O43900 615 aaPredicted RBP17.4■□□□□ 0.38
SMC4-211ENST00000469858 BCAS2O75934 225 aaPredicted RBP17.4■□□□□ 0.38
SMC4-211ENST00000469858 CTSEP14091 401 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 RPS9P46781 194 aaKnown RBP17.4■□□□□ 0.38
SMC4-211ENST00000469858 PHC1P78364 1004 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 PWP1Q13610 501 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 PLCL1Q15111 1095 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 NANOGP8Q6NSW7 305 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 DNAJC14Q6Y2X3 702 aaPredicted RBP17.4■□□□□ 0.38
SMC4-211ENST00000469858 PLD3Q8IV08 490 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 GTF2H4Q92759 462 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 RHBGQ9H310 441 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 NANOGQ9H9S0 305 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 S100A14Q9HCY8 104 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 STX18Q9P2W9 335 aaKnown RBP17.4■□□□□ 0.38
SMC4-211ENST00000469858 BCAP29Q9UHQ4 241 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 ABCA7Q8IZY2 2146 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 DNAH14Q0VDD8 3507 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 ISM1B1AKI9 464 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 OR1F1O43749 312 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 GBAP04062 536 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 PTX3P26022 381 aaPredicted RBP17.4■□□□□ 0.38
SMC4-211ENST00000469858 HKDC1Q2TB90 917 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 PRRT3Q5FWE3 981 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 AAGABQ6PD74 315 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 IYDQ6PHW0 289 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 TAF8Q7Z7C8 310 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 CADM4Q8NFZ8 388 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 OR2L3Q8NG85 312 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 FAM174AQ8TBP5 190 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 CGREF1Q99674 301 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 MIR1-1HGQ9H1L0 117 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 SRMSQ9H3Y6 488 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 SLC6A20Q9NP91 592 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 OR6C2Q9NZP2 312 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 ADGRE2Q9UHX3 823 aa17.4■□□□□ 0.38
SMC4-211ENST00000469858 C15orf38-AP3S2A0A0A6YYH1 394 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 MAP3K13O43283 966 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 PRMT3O60678 531 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 WNT1P04628 370 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 CHRM5P08912 532 aaPredicted RBP17.39■□□□□ 0.37
SMC4-211ENST00000469858 ASMTP46597 345 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 CXCL12P48061 93 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 C1orf61Q13536 156 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 UGT8Q16880 541 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 GALNT18Q6P9A2 607 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 ARPINQ7Z6K5 226 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 GPR180Q86V85 440 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 ANKRD46Q86W74 232 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 FBXL6Q8N531 539 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 OR7A2PQ8NGA2 310 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 WDR48Q8TAF3 677 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 SPACA7Q96KW9 195 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 PITHD1Q9GZP4 211 aaPredicted RBP17.39■□□□□ 0.37
SMC4-211ENST00000469858 PCED1AQ9H1Q7 454 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 APOBEC3BQ9UH17 382 aaKnown RBP17.39■□□□□ 0.37
SMC4-211ENST00000469858 KNL1Q8NG31 2342 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 AXIN1O15169 862 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 DFNA5O60443 496 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 B3GALT4O96024 378 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 COX7A2P14406 83 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 JUNDP17535 347 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 CD38P28907 300 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 KIR3DL1P43629 444 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 BLKP51451 505 aa17.39■□□□□ 0.37
SMC4-211ENST00000469858 MRPS22P82650 360 aaKnown RBP17.39■□□□□ 0.37
SMC4-211ENST00000469858 SLC34A1Q06495 639 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms