RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 AKAP7Q9P0M2 348 aaPredicted RBP14.14□□□□□ -0.15
COL9A3-209ENST00000469852 RALYQ9UKM9 306 aaKnown RBP14.14□□□□□ -0.15
COL9A3-209ENST00000469852 PCDHGA4Q9Y5G9 962 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 B3GALT1Q9Y5Z6 326 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 TRABD2BA6NFA1 517 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 OR1F1O43749 312 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 OR4F21O95013 312 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 TNFSF15O95150 251 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 MED26O95402 600 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 FGF5P12034 268 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 ZNF28P17035 718 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 BGNP21810 368 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 SCTRP47872 440 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 PIK3CGP48736 1102 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 CCNG1P51959 295 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 RPS15AP62244 130 aaKnown RBP14.13□□□□□ -0.15
COL9A3-209ENST00000469852 PPP2R2AP63151 447 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 CYP4F2P78329 520 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 RELAQ04206 551 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 RBBP5Q15291 538 aaKnown RBP14.13□□□□□ -0.15
COL9A3-209ENST00000469852 HKDC1Q2TB90 917 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 ZC3H12BQ5HYM0 836 aaKnown RBP14.13□□□□□ -0.15
COL9A3-209ENST00000469852 HHATQ5VTY9 493 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 GRHL2Q6ISB3 625 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 PWWP2BQ6NUJ5 590 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 VN1R5Q7Z5H4 357 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 MYLK4Q86YV6 388 aaPredicted RBP14.13□□□□□ -0.15
COL9A3-209ENST00000469852 NUDCD3Q8IVD9 361 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.13□□□□□ -0.15
COL9A3-209ENST00000469852 DTWD1Q8N5C7 304 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 L3MBTL4Q8NA19 623 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 MFSD9Q8NBP5 474 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 AGAP11Q8TF27 550 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 ATP6V1E2Q96A05 226 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 KCNA7Q96RP8 456 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 EFCAB11Q9BUY7 163 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 ZNF395Q9H8N7 513 aaPredicted RBP14.13□□□□□ -0.15
COL9A3-209ENST00000469852 NKIRAS1Q9NYS0 192 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 FOXJ2Q9P0K8 574 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 NEUROG3Q9Y4Z2 214 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 PCDHGA8Q9Y5G5 932 aa14.13□□□□□ -0.15
COL9A3-209ENST00000469852 SDK2Q58EX2 2172 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 FER1L5A0AVI2 2057 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 POLR1CO15160 346 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-209ENST00000469852 BIRC5O15392 142 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 MAP3K7O43318 606 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 CLDN9O95484 217 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 TBX6O95947 436 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-209ENST00000469852 EIF2S1P05198 315 aaKnown RBP14.12□□□□□ -0.15
COL9A3-209ENST00000469852 CHRNGP07510 517 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 CHN1P15882 459 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 GRK3P35626 688 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 ARL1P40616 181 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-209ENST00000469852 GCGRP47871 477 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 LCP2Q13094 533 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 CHI3L2Q15782 390 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 CPSF6Q16630 551 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL9A3-209ENST00000469852 CFAP157Q5JU67 520 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 TCHHL1Q5QJ38 904 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-209ENST00000469852 WASHC2DQ5SRD0 308 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 LIPJQ5W064 366 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 UNQ6494/PRO21346Q6UXR6 183 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 TMIGD1Q6UXZ0 262 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 MILR1Q7Z6M3 343 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 TM4SF19Q96DZ7 209 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 TAAR9Q96RI9 348 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 ZNF382Q96SR6 550 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 AICDAQ9GZX7 198 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 ASCL3Q9NQ33 180 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 RARRES3Q9UL19 164 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 MRPS2Q9Y399 296 aaKnown RBP14.12□□□□□ -0.15
COL9A3-209ENST00000469852 MSRB2Q9Y3D2 182 aa14.12□□□□□ -0.15
COL9A3-209ENST00000469852 ZZEF1O43149 2961 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 FFAR3O14843 346 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 GPR42O15529 346 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 ITM2AO43736 263 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 BRINP1O60477 761 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 H2AFYO75367 372 aaKnown RBP14.11□□□□□ -0.15
COL9A3-209ENST00000469852 LYPLA1O75608 230 aaPredicted RBP14.11□□□□□ -0.15
COL9A3-209ENST00000469852 OR2B3O76000 313 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 OTCP00480 354 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 NR1D1P20393 614 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 FOXA1P55317 472 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 ITGA1P56199 1179 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 HYAL2Q12891 473 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 IL11RAQ14626 422 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 RTP5Q14D33 572 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 ZRSR2Q15696 482 aaKnown RBP14.11□□□□□ -0.15
COL9A3-209ENST00000469852 PRTGQ2VWP7 1150 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 GPRIN3Q6ZVF9 776 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 PPP1R3BQ86XI6 285 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 LAS2Q8IYD9 372 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 KRT78Q8N1N4 520 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 ARHGEF39Q8N4T4 335 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 ZNF655Q8N720 491 aaPredicted RBP14.11□□□□□ -0.15
COL9A3-209ENST00000469852 CSNK1A1LQ8N752 337 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 KDF1Q8NAX2 398 aaPredicted RBP14.11□□□□□ -0.15
COL9A3-209ENST00000469852 SLC38A9Q8NBW4 561 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 OR7G3Q8NG95 312 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 CREB3L4Q8TEY5 395 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms