RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PA2G4Q9UQ80 394 aaKnown RBP3.47□□□□□ -1.85
SMC4-207ENST00000467263 LIPGQ9Y5X9 500 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 SELENOKQ9Y6D0 94 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 MTMR11A4FU01 709 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 C17orf105B2RV13 164 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 CCDC175P0C221 793 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 GATA2P23769 480 aaPredicted RBP3.46□□□□□ -1.86
SMC4-207ENST00000467263 SFTPDP35247 375 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 IRX4P78413 519 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 LY6DQ14210 128 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 HYAL4Q2M3T9 481 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 TCTEX1D4Q5JR98 221 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 C1orf141Q5JVX7 400 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 SUSD4Q5VX71 490 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 TMED8Q6PL24 325 aaPredicted RBP3.46□□□□□ -1.86
SMC4-207ENST00000467263 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 CHST3Q7LGC8 479 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 SH2D6Q7Z4S9 175 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 PIGWQ7Z7B1 504 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 METTL4Q8N3J2 472 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 GBP7Q8N8V2 638 aaPredicted RBP3.46□□□□□ -1.86
SMC4-207ENST00000467263 CCDC63Q8NA47 563 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 OR5T2Q8NGG2 359 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 OR4C15Q8NGM1 316 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 C9orf43Q8TAL5 461 aaPredicted RBP3.46□□□□□ -1.86
SMC4-207ENST00000467263 SOSTQ9BQB4 213 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 OR10A4Q9H209 315 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 RNF121Q9H920 327 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 NDE1Q9NXR1 346 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 PKD2L2Q9NZM6 624 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 HACD3Q9P035 362 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 ELF5Q9UKW6 265 aaPredicted RBP3.46□□□□□ -1.86
SMC4-207ENST00000467263 WIPI2Q9Y4P8 454 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 CCL27Q9Y4X3 112 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 NOTCH2Q04721 2471 aa3.46□□□□□ -1.86
SMC4-207ENST00000467263 LOC105371242A0A075B767 164 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 IGHV3OR16-10A0A075B7F0 116 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 A0A1W2PPW3 197 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 GLTPD2A6NH11 291 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 ASB14A6NK59 587 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 HMGB1P1B2RPK0 211 aaPredicted RBP3.45□□□□□ -1.86
SMC4-207ENST00000467263 NPIPB9F8W1W9 429 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 PLOD3O60568 738 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 CEACAM4O75871 244 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 SLC8A3P57103 927 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 DHODHQ02127 395 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 CACNG1Q06432 222 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 RBBP7Q16576 425 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 LBHQ53QV2 105 aaPredicted RBP3.45□□□□□ -1.86
SMC4-207ENST00000467263 GDPGP1Q6ZNW5 385 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 ZER1Q7Z7L7 766 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 LMNTD2Q8IXW0 634 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 CCAR2Q8N163 923 aaKnown RBP3.45□□□□□ -1.86
SMC4-207ENST00000467263 SEPT1Q8WYJ6 367 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 NSMAFQ92636 917 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 RMDN2Q96LZ7 410 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 NEDD4LQ96PU5 975 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 OVOL2Q9BRP0 275 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 PHPT1Q9NRX4 125 aaPredicted RBP3.45□□□□□ -1.86
SMC4-207ENST00000467263 TBC1D13Q9NVG8 400 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 CLIC5Q9NZA1 410 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 LNPEPQ9UIQ6 1025 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 HEG1Q9ULI3 1381 aa3.45□□□□□ -1.86
SMC4-207ENST00000467263 COL5A2P05997 1499 aaPredicted RBP3.44□□□□□ -1.86
SMC4-207ENST00000467263 G3V2L1 256 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 SLC1A7O00341 560 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 RTCAO00442 366 aaKnown RBP3.44□□□□□ -1.86
SMC4-207ENST00000467263 TFECO14948 347 aaPredicted RBP3.44□□□□□ -1.86
SMC4-207ENST00000467263 SURF4O15260 269 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 CYTIPO60759 359 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 PRAF2O60831 178 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 RECQL5O94762 991 aaPredicted RBP3.44□□□□□ -1.86
SMC4-207ENST00000467263 THEGLP0DJG4 465 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 AADACP22760 399 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 CDC25CP30307 473 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 DUTP33316 252 aaKnown RBP3.44□□□□□ -1.86
SMC4-207ENST00000467263 RGS7P49802 495 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 CSRP3P50461 194 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 RAD23AP54725 363 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 KRTAP10-8P60410 259 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 PAX8Q06710 450 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 COX10Q12887 443 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 ZNF273Q14593 569 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 ALDH1L2Q3SY69 923 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 LRRC73Q5JTD7 316 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 TTC27Q6P3X3 843 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 LCLAT1Q6UWP7 414 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 ANKRD33Q7Z3H0 272 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 CPEB2Q7Z5Q1 589 aaKnown RBP3.44□□□□□ -1.86
SMC4-207ENST00000467263 NRARPQ7Z6K4 114 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 P2RY8Q86VZ1 359 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 AMIGO1Q86WK6 493 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 APCDD1Q8J025 514 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 Q8N377 158 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 Q8NFD4 153 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 FER1L6-AS2Q96M78 137 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 DNAI2Q9GZS0 605 aa3.44□□□□□ -1.86
SMC4-207ENST00000467263 MTHFD2LQ9H903 347 aaPredicted RBP3.44□□□□□ -1.86
SMC4-207ENST00000467263 NFKBIL1Q9UBC1 381 aaPredicted RBP3.44□□□□□ -1.86
SMC4-207ENST00000467263 BAIAP2L1Q9UHR4 511 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms