RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 BCHEP06276 602 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 CD48P09326 243 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ZNF865P0CJ78 1059 aaPredicted RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 ZNF30P17039 623 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 GSTM3P21266 225 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 AZGP1P25311 298 aaKnown RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 PIK3CBP42338 1070 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ASPAP45381 313 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 CDK10Q15131 360 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 JAGN1Q8N5M9 183 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 OR10G2Q8NGC3 310 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 LRTOMTQ8WZ04 291 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 FCGR1BQ92637 280 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 NODALQ96S42 347 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 MCOLN1Q9GZU1 580 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 SLC6A15Q9H2J7 730 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 CCDC86Q9H6F5 360 aaKnown RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 MALT1Q9UDY8 824 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 FZD4Q9ULV1 537 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 CNTN6Q9UQ52 1028 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 FAM149AA5PLN7 773 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 NPIPA2E9PIF3 369 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 NPIPA3F8WFD2 350 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 NOBOXO60393 691 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 FARS2O95363 451 aaKnown RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 PDYNP01213 254 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ERCC1P07992 297 aaPredicted RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 HK1P19367 917 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ENTPD1P49961 510 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 MTPNP58546 118 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 FOXR2Q6PJQ5 311 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 GRASPQ7Z6J2 395 aaPredicted RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 ZNF781Q8N8C0 355 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 OR5T2Q8NGG2 359 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 OR5AK3PQ8NH89 298 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 FBXL18Q96ME1 805 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 COL21A1Q96P44 957 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 EURLQ9NYK6 297 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 ABCD2Q9UBJ2 740 aa8.47□□□□□ -1.05
HPS4-209ENST00000466781 EIF3KQ9UBQ5 218 aaKnown RBP8.47□□□□□ -1.05
HPS4-209ENST00000466781 HAS3O00219 553 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 RAP2AP10114 183 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 PRPS1L1P21108 318 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 PDCD4Q53EL6 469 aaKnown RBP8.46□□□□□ -1.05
HPS4-209ENST00000466781 FAM182AQ5T1J6 154 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 ZER1Q7Z7L7 766 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 THOC6Q86W42 341 aaKnown RBP8.46□□□□□ -1.05
HPS4-209ENST00000466781 FAM86B1Q8N7N1 296 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 OR56A1Q8NGH5 318 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 GEMIN6Q8WXD5 167 aaKnown RBP8.46□□□□□ -1.05
HPS4-209ENST00000466781 PPP1R14BQ96C90 147 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 ZDHHC12Q96GR4 267 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 TMEM68Q96MH6 324 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 GORASP1Q9BQQ3 440 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 ZNF69Q9UC07 566 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 PDE10AQ9Y233 779 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 PADI2Q9Y2J8 665 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 TTC24A2A3L6 582 aaPredicted RBP8.46□□□□□ -1.05
HPS4-209ENST00000466781 M0R129 80 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 TLR4O00206 839 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 RNF13O43567 381 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 HRGP04196 525 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 IDH3AP50213 366 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 AP2S1P53680 142 aaPredicted RBP8.46□□□□□ -1.05
HPS4-209ENST00000466781 MYLK3Q32MK0 819 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 PITRM1Q5JRX3 1037 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 KIAA0930Q6ICG6 404 aaPredicted RBP8.46□□□□□ -1.05
HPS4-209ENST00000466781 CRELD2Q6UXH1 353 aaPredicted RBP8.46□□□□□ -1.05
HPS4-209ENST00000466781 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.05
HPS4-209ENST00000466781 TAS1R3Q7RTX0 852 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 TMCO2Q7Z6W1 182 aaPredicted RBP8.46□□□□□ -1.05
HPS4-209ENST00000466781 RASGEF1CQ8N431 466 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 MFSD2AQ8NA29 543 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 SCAMP5Q8TAC9 235 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 SMPDL3AQ92484 453 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 CCDC120Q96HB5 630 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 ANKRA2Q9H9E1 313 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 IGSF9Q9P2J2 1179 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 SQORQ9Y6N5 450 aa8.46□□□□□ -1.05
HPS4-209ENST00000466781 A0A1B0GVC2 190 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 LRRC10BA6NIK2 292 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 LAMTOR5O43504 91 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 CNMDO75829 334 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 CYP11A1P05108 521 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 ITGB1P05556 798 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 GJA1P17302 382 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 BMP8BP34820 402 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 MAGEA12P43365 314 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 CHRNA6Q15825 494 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 ADGRF1Q5T601 910 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 Q6ZVU0 165 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 BMP8AQ7Z5Y6 402 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 IL22RA1Q8N6P7 574 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 OR2L2Q8NH16 312 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 TM9SF2Q99805 663 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 APOBEC3GQ9HC16 384 aaKnown RBP8.46□□□□□ -1.06
HPS4-209ENST00000466781 COMMD3Q9UBI1 195 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 KCNS2Q9ULS6 477 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 PLAGL1Q9UM63 463 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms