RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CYLC2Q14093 348 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-215ENST00000465457 SNCBQ16143 134 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 GSTA3Q16772 222 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 AMZ1Q400G9 498 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 CLEC6AQ6EIG7 209 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 GTF2H2CQ6P1K8 395 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 C16orf89Q6UX73 402 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 RINLQ6ZS11 566 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 LARP4Q71RC2 724 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC6-215ENST00000465457 DET1Q7L5Y6 550 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 GOLGA7Q7Z5G4 137 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 SYVN1Q86TM6 617 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 ATCAYQ86WG3 371 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 GKN2Q86XP6 184 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 RASGRP3Q8IV61 690 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 DDIASQ8IXT1 998 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 RASGEF1AQ8N9B8 481 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 SKA2Q8WVK7 121 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-215ENST00000465457 UTP4Q969X6 686 aaKnown RBP13.34□□□□□ -0.27
HDAC6-215ENST00000465457 LINC00615Q96LM1 132 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-215ENST00000465457 CCDC74BQ96LY2 380 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 MIPEPQ99797 713 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 C1QTNF7Q9BXJ2 289 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 CADM1Q9BY67 442 aaKnown RBP13.34□□□□□ -0.27
HDAC6-215ENST00000465457 SLC29A3Q9BZD2 475 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 TRIM39Q9HCM9 518 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 MRPL40Q9NQ50 206 aaKnown RBP13.34□□□□□ -0.27
HDAC6-215ENST00000465457 ARL15Q9NXU5 204 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 LRIT1Q9P2V4 623 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 TRPS1Q9UHF7 1281 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 ADAMTS6Q9UKP5 1117 aa13.34□□□□□ -0.27
HDAC6-215ENST00000465457 COPG1Q9Y678 874 aaKnown RBP13.34□□□□□ -0.27
HDAC6-215ENST00000465457 OTOGQ6ZRI0 2925 aa13.33□□□□□ -0.27
HDAC6-215ENST00000465457 PRRC2CQ9Y520 2896 aaKnown RBP13.33□□□□□ -0.28
HDAC6-215ENST00000465457 LRRC14BA6NHZ5 514 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 ZNF891A8MT65 544 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-215ENST00000465457 PIP5K1BO14986 540 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 SGTAO43765 313 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 RAD1O60671 282 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 CIB2O75838 187 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 TM7SF2O76062 418 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 MATN4O95460 622 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 SOD1P00441 154 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 EBLN1P0CF75 366 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 IDO1P14902 403 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 LBPP18428 481 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 MAP4P27816 1152 aaKnown RBP13.33□□□□□ -0.28
HDAC6-215ENST00000465457 AGTR2P50052 363 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 RAP1GDS1P52306 607 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 OR1D5P58170 312 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 SRP54P61011 504 aaKnown RBP13.33□□□□□ -0.28
HDAC6-215ENST00000465457 NFATC4Q14934 902 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 PHKG1Q16816 387 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 SMU1Q2TAY7 513 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 WSCD2Q2TBF2 565 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 DEFB109BQ30KR1 87 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 C14orf28Q4W4Y0 310 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 XKR7Q5GH72 579 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 TMEM164Q5U3C3 297 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 FBXW10Q5XX13 1052 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 CAPRIN2Q6IMN6 1127 aaKnown RBP13.33□□□□□ -0.28
HDAC6-215ENST00000465457 RPS27LQ71UM5 84 aaKnown RBP13.33□□□□□ -0.28
HDAC6-215ENST00000465457 SLC22A15Q8IZD6 547 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 FBXO15Q8NCQ5 510 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-215ENST00000465457 FAM13CQ8NE31 585 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 OR1E3Q8WZA6 343 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 ATP6V1E2Q96A05 226 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 RNF31Q96EP0 1072 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 PPP1R36Q96LQ0 422 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 CATSPER2Q96P56 530 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 NTMT1Q9BV86 223 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 NOL11Q9H8H0 719 aaKnown RBP13.33□□□□□ -0.28
HDAC6-215ENST00000465457 IPPKQ9H8X2 491 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 FGF22Q9HCT0 170 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 TNFRSF12AQ9NP84 129 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 TMEM9Q9P0T7 183 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 KLQ9UEF7 1012 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 PRPF19Q9UMS4 504 aaKnown RBP13.33□□□□□ -0.28
HDAC6-215ENST00000465457 ITPR3Q14573 2671 aa13.33□□□□□ -0.28
HDAC6-215ENST00000465457 F8P00451 2351 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 IGHV5-10-1A0A0J9YXX1 117 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 SLC5A10A0PJK1 596 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 BBIP1A8MTZ0 92 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 PSMD12O00232 456 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-215ENST00000465457 CCNT2O60583 730 aaKnown RBP13.32□□□□□ -0.28
HDAC6-215ENST00000465457 MTX2O75431 263 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 PSIP1O75475 530 aaKnown RBP13.32□□□□□ -0.28
HDAC6-215ENST00000465457 ATP6V1G2O95670 118 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 GUCA1CO95843 209 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 TSPAN8P19075 237 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 CSF2RBP32927 897 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 HSPA7P48741 367 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 BLKP51451 505 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 CCNG1P51959 295 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 ZNF33BQ06732 778 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 KLRB1Q12918 225 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 TRMT5Q32P41 509 aaKnown RBP13.32□□□□□ -0.28
HDAC6-215ENST00000465457 KHDC1Q4VXA5 237 aaKnown RBP13.32□□□□□ -0.28
HDAC6-215ENST00000465457 SPNS2Q8IVW8 549 aa13.32□□□□□ -0.28
HDAC6-215ENST00000465457 FAM46DQ8NEK8 389 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms