RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 MFSD9Q8NBP5 474 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 CAMKVQ8NCB2 501 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 SNIP1Q8TAD8 396 aaKnown RBP17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 SLC13A3Q8WWT9 602 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 KIAA1143Q96AT1 154 aaPredicted RBP17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 CCDC126Q96EE4 140 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 THAP11Q96EK4 314 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 CNTNAP3BQ96NU0 1288 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 OR2A5Q96R48 311 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 EFCAB11Q9BUY7 163 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 CNTNAP3Q9BZ76 1288 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 SPNS1Q9H2V7 528 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 NOL11Q9H8H0 719 aaKnown RBP17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 ACSS2Q9NR19 701 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 CUTCQ9NTM9 273 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 GEMIN8Q9NWZ8 242 aaKnown RBP17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 MKS1Q9NXB0 559 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 TMEM184BQ9Y519 407 aaPredicted RBP17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 PCDHGA4Q9Y5G9 962 aa17.68■□□□□ 0.42
SCAMP3-204ENST00000465312 SDK2Q58EX2 2172 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 HYKKA2RU49 373 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 ANKDD1BA6NHY2 528 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 E2F3O00716 465 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 LCMT2O60294 686 aaKnown RBP17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 DLGAP3O95886 979 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 CPA3P15088 417 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 TSPAN8P19075 237 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 HERVK_113P63132 956 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 RGS1Q08116 209 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 NDUFA9Q16795 377 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 CFAP157Q5JU67 520 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 TMIGD1Q6UXZ0 262 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 RPS27LQ71UM5 84 aaKnown RBP17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 PROSER1Q86XN7 944 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 OR4K1Q8NGD4 311 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 ZCCHC10Q8TBK6 192 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 RDH11Q8TC12 318 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 TCP10LQ8TDR4 215 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 PGM2Q96G03 612 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 NSUN5Q96P11 429 aaKnown RBP17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 MACROD1Q9BQ69 325 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 ERVK-6Q9BXR3 956 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 DRC3Q9H069 523 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 PCTPQ9UKL6 214 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 PADI1Q9ULC6 663 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 RUVBL1Q9Y265 456 aaKnown RBP17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 PLLPQ9Y342 182 aa17.67■□□□□ 0.42
SCAMP3-204ENST00000465312 P2RX6O15547 441 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 CREB1P16220 341 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 CDH13P55290 713 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 NFKB2Q00653 900 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 RELAQ04206 551 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 GPS2Q13227 327 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 DDX39BQ13838 428 aaKnown RBP17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 SLC9A5Q14940 896 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 MUM1Q2TAK8 710 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 BROXQ5VW32 411 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 TTC19Q6DKK2 380 aaPredicted RBP17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 METTL2BQ6P1Q9 378 aaKnown RBP17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 TIPARPQ7Z3E1 657 aaKnown RBP17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 VASH2Q86V25 355 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 EXOC3L1Q86VI1 746 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.66■□□□□ 0.425e-6■■■■■ 81.8
SCAMP3-204ENST00000465312 TMEM151AQ8N4L1 468 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 SREK1Q8WXA9 508 aaKnown RBP17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 TMEM237Q96Q45 408 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 YIPF2Q9BWQ6 316 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 EHD1Q9H4M9 534 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 SLC17A7Q9P2U7 560 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 GPN3Q9UHW5 284 aaPredicted RBP17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 ZFP69BQ9UJL9 534 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 ACSL6Q9UKU0 697 aa17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 MDC1Q14676 2089 aaKnown RBP17.66■□□□□ 0.42
SCAMP3-204ENST00000465312 SPTBP11277 2137 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 A0A1B0GX78 115 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 C9J4A7 227 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 MEN1O00255 615 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 RPS17P08708 135 aaKnown RBP17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 HNF4AP41235 474 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 SCTRP47872 440 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 PRKAA2P54646 552 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 CLN3Q13286 438 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 ZNF678Q5SXM1 525 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 YOD1Q5VVQ6 348 aaPredicted RBP17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 RHBDD2Q6NTF9 364 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 MED27Q6P2C8 311 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 FAM199XQ6PEV8 388 aaPredicted RBP17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 VN1R4Q7Z5H5 301 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 SLC38A9Q8NBW4 561 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 TRPV3Q8NET8 790 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 TTLQ8NG68 377 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 TRPC4APQ8TEL6 797 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 NKD1Q969G9 470 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 UBE2E3Q969T4 207 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 CDK15Q96Q40 435 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 ACBD3Q9H3P7 528 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 SYNPO2LQ9H987 977 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 GPN2Q9H9Y4 310 aaPredicted RBP17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 LHX9Q9NQ69 397 aa17.65■□□□□ 0.42
SCAMP3-204ENST00000465312 COPG2Q9UBF2 871 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms