RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 AENQ8WTP8 325 aaKnown RBP16.85■□□□□ 0.29
VPS52-214ENST00000463486 UBTD2Q8WUN7 234 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 MACROD1Q9BQ69 325 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 CD244Q9BZW8 370 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 VPS11Q9H270 941 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 SLC26A1Q9H2B4 701 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 PELI2Q9HAT8 420 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 TXLNGQ9NUQ3 528 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 NUDT4Q9NZJ9 180 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 CD274Q9NZQ7 290 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.85■□□□□ 0.29
VPS52-214ENST00000463486 KCNE2Q9Y6J6 123 aa16.85■□□□□ 0.29
VPS52-214ENST00000463486 V9GYY5 206 aaPredicted RBP16.85■□□□□ 0.29
VPS52-214ENST00000463486 PCSK5Q92824 1860 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 TRBC2A0A5B9 178 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 STK16O75716 305 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 IPO13O94829 963 aaKnown RBP16.84■□□□□ 0.29
VPS52-214ENST00000463486 WDR47O94967 919 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 SBK3P0C264 359 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 PRKAR1AP10644 381 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 COL6A2P12110 1019 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 SCTRP47872 440 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 OR1D4P47884 311 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 AGTR2P50052 363 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 REEP5Q00765 189 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 MC1RQ01726 317 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 E2F2Q14209 437 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 ERV3-1Q14264 604 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 UGT8Q16880 541 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 ERCC6LQ2NKX8 1250 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 TECRLQ5HYJ1 363 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 SH2D5Q6ZV89 423 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 TAOK1Q7L7X3 1001 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 OVCH1Q7RTY7 1134 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 SYVN1Q86TM6 617 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 SHISA5Q8N114 240 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 METTL27Q8N6F8 245 aaPredicted RBP16.84■□□□□ 0.29
VPS52-214ENST00000463486 ANKRD53Q8N9V6 530 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 MOCOSQ96EN8 888 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 COPG2Q9UBF2 871 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 CCDC88CQ9P219 2028 aa16.84■□□□□ 0.29
VPS52-214ENST00000463486 VSTM2BA6NLU5 285 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 ERVH48-1M5A8F1 160 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 C1GALT1C1LP0DN25 315 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 GNAZP19086 355 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 HSD17B3P37058 310 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 PCDH1Q08174 1060 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 HYAL2Q12891 473 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 CDC16Q13042 620 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 FAM53BQ14153 422 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 MUM1Q2TAK8 710 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 SOWAHCQ53LP3 525 aaPredicted RBP16.83■□□□□ 0.28
VPS52-214ENST00000463486 MLIPQ5VWP3 458 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 TMEM214Q6NUQ4 689 aaKnown RBP16.83■□□□□ 0.28
VPS52-214ENST00000463486 C16orf46Q6P387 395 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 AMER3Q8N944 861 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 EXD3Q8N9H8 876 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 EXTL1Q92935 676 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 EXT2Q93063 718 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 RERGQ96A58 199 aaPredicted RBP16.83■□□□□ 0.28
VPS52-214ENST00000463486 FKBP10Q96AY3 582 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 MTBPQ96DY7 904 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 WDR34Q96EX3 536 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 WBP1Q96G27 269 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 CNOT10Q9H9A5 744 aaKnown RBP16.83■□□□□ 0.28
VPS52-214ENST00000463486 DNAJC11Q9NVH1 559 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 GEMIN8Q9NWZ8 242 aaKnown RBP16.83■□□□□ 0.28
VPS52-214ENST00000463486 WWOXQ9NZC7 414 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 GPRC5BQ9NZH0 403 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 IFT80Q9P2H3 777 aaPredicted RBP16.83■□□□□ 0.28
VPS52-214ENST00000463486 NDOR1Q9UHB4 597 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 DYRK1BQ9Y463 629 aa16.83■□□□□ 0.28
VPS52-214ENST00000463486 IGLV3-12A0A075B6K2 115 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 C9J4A7 227 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 TXNDC9O14530 226 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 OR1F1O43749 312 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 TBX6O95947 436 aaPredicted RBP16.82■□□□□ 0.28
VPS52-214ENST00000463486 ALBP02768 609 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 UMODP07911 640 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 CD22P20273 847 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 DEKP35659 375 aaKnown RBP16.82■□□□□ 0.28
VPS52-214ENST00000463486 NKG7Q16617 165 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 LGSNQ5TDP6 509 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 ATG9BQ674R7 924 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 PRMT9Q6P2P2 845 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 PRSS41Q7RTY9 318 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 TMPRSS11BQ86T26 416 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 ASPGQ86U10 573 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 TDRPQ86YL5 185 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 CYP4X1Q8N118 509 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 AFAP1L2Q8N4X5 818 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 KCT2Q8NC54 265 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 OR2Y1Q8NGV0 311 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 CREB3L4Q8TEY5 395 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 UBLCP1Q8WVY7 318 aaPredicted RBP16.82■□□□□ 0.28
VPS52-214ENST00000463486 SLC13A3Q8WWT9 602 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 MVB12AQ96EY5 273 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 CABS1Q96KC9 395 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 UBL7Q96S82 380 aaPredicted RBP16.82■□□□□ 0.28
VPS52-214ENST00000463486 SPSB2Q99619 263 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms