RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CCDC68Q9H2F9 335 aa7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 SYNPO2LQ9H987 977 aa7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 CUTCQ9NTM9 273 aa7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 IRAK4Q9NWZ3 460 aa7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 TRMT6Q9UJA5 497 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 ADAMTS6Q9UKP5 1117 aa7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 IKZF3Q9UKT9 509 aa7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 CORO1CQ9ULV4 474 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 UTP11Q9Y3A2 253 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 KLK4Q9Y5K2 254 aa7.55□□□□□ -1.2
CDC42BPA-210ENST00000462553 IGKV1-8A0A0C4DH67 115 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 TCRBV9S1A1TA0A576 114 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 FAM159BA6NKW6 160 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 HNRNPRO43390 633 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 KDM1AO60341 852 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 CTSVO60911 334 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 VPS26AO75436 327 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 KLHL18O94889 574 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 WISP3O95389 354 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 CATP04040 527 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 ALAS2P22557 587 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 ELAVL4P26378 380 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 GRNP28799 593 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 IMPA1P29218 277 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 ECHS1P30084 290 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 SOX11P35716 441 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 GRIA3P42263 894 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 SKIV2L2P42285 1042 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 OR1D4P47884 311 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 ARSFP54793 590 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 PER3P56645 1201 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 GUCY2DQ02846 1103 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 CDC16Q13042 620 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 MFAP5Q13361 173 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 ZNF460Q14592 562 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 FAM45BPQ6NSW5 357 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 RPUSD3Q6P087 351 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 PAQR3Q6TCH7 311 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 MBOAT1Q6ZNC8 495 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 FJX1Q86VR8 437 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 SLC26A11Q86WA9 606 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 PARP9Q8IXQ6 854 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 GPATCH11Q8N954 259 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 CATSPER1Q8NEC5 780 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 OR2A1Q8NGT9 310 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 DNAJB14Q8TBM8 379 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 FAM45AQ8TCE6 357 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 PYROXD1Q8WU10 500 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 ZNF480Q8WV37 535 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 EEF1AKMT1Q8WVE0 214 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 PSMF1Q92530 271 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 THOC3Q96J01 351 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 C10orf90Q96M02 699 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 TAAR6Q96RI8 345 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 PKP4Q99569 1192 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 MIPEPQ99797 713 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 SELENOSQ9BQE4 189 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 PPANQ9NQ55 473 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 FAM114A2Q9NRY5 505 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 TAS2R13Q9NYV9 303 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 ZFATQ9P243 1243 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 DMGDHQ9UI17 866 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 SLC39A10Q9ULF5 831 aa7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 HRNRQ86YZ3 2850 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-210ENST00000462553 INTS1Q8N201 2190 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 IGLV3-12A0A075B6K2 115 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 FAM95CA0A1B0GW59 222 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 A0A1W2PQ72 361 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 OR2A25A4D2G3 310 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 KIF2AO00139 706 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 PCDH17O14917 1159 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 SLC16A8O95907 504 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 HPP00738 406 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 TUBB4AP04350 444 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 COX6A1P12074 109 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 ZNF37AP17032 561 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 EFNA3P52797 238 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 PNLIPRP1P54315 467 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 KCNK10P57789 538 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 TAS2R39P59534 338 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 CAV1Q03135 178 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 KLC1Q07866 573 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 GRM7Q14831 915 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 ARHGAP19Q14CB8 494 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 EFTUD2Q15029 972 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 TLR1Q15399 786 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 RBBP7Q16576 425 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 ZXDCQ2QGD7 858 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 TCTE1Q5JU00 501 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 YOD1Q5VVQ6 348 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 FRMPD2BQ6IN97 320 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 UGT3A1Q6NUS8 523 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 FIGLAQ6QHK4 219 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 FAM180AQ6UWF9 173 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 SUSD1Q6UWL2 747 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 SBSNQ6UWP8 590 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 ISLR2Q6UXK2 745 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 LINC00696Q6ZRV3 163 aa7.53□□□□□ -1.2
CDC42BPA-210ENST00000462553 UBE2R2Q712K3 238 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms