RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 GFERP55789 205 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 CLDN6P56747 220 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 ERVPABLB-1P60509 514 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 VSNL1P62760 191 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 HSPA14Q0VDF9 509 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 TARDBPQ13148 414 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS36-202ENST00000462289 SPIDRQ14159 915 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 C16orf72Q14CZ0 275 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 TMED2Q15363 201 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 TCEA2Q15560 299 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 SEPT7Q16181 437 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 SLC5A12Q1EHB4 618 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 KLHL38Q2WGJ6 581 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 TTLL9Q3SXZ7 439 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 CCSMST1Q4G0I0 132 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 GRTP1Q5TC63 336 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 UGT3A1Q6NUS8 523 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 POMZP3Q6PJE2 187 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 VHLLQ6RSH7 139 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 NAPRTQ6XQN6 538 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 ZNF517Q6ZMY9 492 aaPredicted RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 TIFABQ6ZNK6 161 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 STRA8Q7Z7C7 330 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 PIM3Q86V86 326 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 PLXDC1Q8IUK5 500 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 PALM2Q8IXS6 379 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 CENPLQ8N0S6 344 aaPredicted RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 D2HGDHQ8N465 521 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 LMNTD1Q8N9Z9 388 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 SIDT2Q8NBJ9 832 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 BVESQ8NE79 360 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 OR2A1Q8NGT9 310 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 OR10G6Q8NH81 332 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 DCAKDQ8WVC6 231 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 ANKRD49Q8WVL7 239 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 CDKL2Q92772 493 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 CAVIN3Q969G5 261 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 CXorf40BQ96DE9 158 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 SLC46A1Q96NT5 459 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 OR2A14Q96R47 310 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 CYTH2Q99418 400 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 NRTNQ99748 197 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 TMEM109Q9BVC6 243 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 SARGQ9BW04 601 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 RAB11FIP5Q9BXF6 653 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 DERL2Q9GZP9 239 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 ABCG4Q9H172 646 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 STN1Q9H668 368 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 POLR1BQ9H9Y6 1135 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 PPCSQ9HAB8 311 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 FBXO8Q9NRD0 319 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 IMP3Q9NV31 184 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 IKZF3Q9UKT9 509 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 ANGPTL2Q9UKU9 493 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 ASF1AQ9Y294 204 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 MTO1Q9Y2Z2 717 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 CFAP20Q9Y6A4 193 aaKnown RBP5.53□□□□□ -1.52
VPS36-202ENST00000462289 BSNQ9UPA5 3926 aa5.53□□□□□ -1.52
VPS36-202ENST00000462289 IGHV5-51A0A0C4DH38 117 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 IGKV1-8A0A0C4DH67 115 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 PMS2P1A4D2B8 440 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 OR2A25A4D2G3 310 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 TMEM8BA6NDV4 472 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 TARM1B6A8C7 271 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 E7ENX8 843 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 CTIFO43310 598 aaKnown RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 KLK8O60259 260 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 SLC16A8O95907 504 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 ONECUT2O95948 504 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 RPN2P04844 631 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 C8BP07358 591 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 C8GP07360 202 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 TUBBP07437 444 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 CHRM5P08912 532 aaPredicted RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 ENO2P09104 434 aaPredicted RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 RHOXF2BP0C7M4 288 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 FGF3P11487 239 aaPredicted RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 FGF5P12034 268 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 MTHFD2P13995 350 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 CHRM3P20309 590 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 CNTFP26441 200 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 IMPA1P29218 277 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 ALDH4A1P30038 563 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 PBLDP30039 288 aaPredicted RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 PRDX3P30048 256 aaKnown RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 SPRP35270 261 aaPredicted RBP5.52□□□□□ -1.53
VPS36-202ENST00000462289 GGT5P36269 586 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 HSD17B2P37059 387 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 INHBCP55103 352 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 AP1S2P56377 157 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 PPP1CAP62136 330 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 MC2RQ01718 297 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 TAP2Q03519 686 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 DLG1Q12959 904 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 KIR2DS3Q14952 304 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 EFTUD2Q15029 972 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS36-202ENST00000462289 PHKG1Q16816 387 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 TNFAIP8L3Q5GJ75 292 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 NKAIN2Q5VXU1 208 aa5.52□□□□□ -1.53
VPS36-202ENST00000462289 ANKS6Q68DC2 871 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms