RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ATL1Q8WXF7 558 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 TM9SF4Q92544 642 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 C8orf44Q96CB5 159 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 THAP11Q96EK4 314 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 PDLIM5Q96HC4 596 aaKnown RBP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 MESP1Q9BRJ9 268 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 HAUS8Q9BT25 410 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 PHACTR1Q9C0D0 580 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 RAB17Q9H0T7 212 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 ZNF552Q9H707 407 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 POPDC3Q9HBV1 291 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 SLAMF7Q9NQ25 335 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 SMYD2Q9NRG4 433 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 NOVA2Q9UNW9 492 aaKnown RBP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 UTP11Q9Y3A2 253 aaKnown RBP9.66□□□□□ -0.86
SF3A3-204ENST00000462258 MAP4K5Q9Y4K4 846 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 LRRK2Q5S007 2527 aa9.66□□□□□ -0.86
SF3A3-204ENST00000462258 HECTD1Q9ULT8 2610 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 KCNE1BA0A087WTH5 132 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 TCRBV9S1A1TA0A576 114 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 CDC7O00311 574 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 PIAS1O75925 651 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 NSA2O95478 260 aaKnown RBP9.65□□□□□ -0.86
SF3A3-204ENST00000462258 HPP00738 406 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 COX6A1P12074 109 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 IL1RNP18510 177 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 CCR8P51685 355 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 SLC12A2P55011 1212 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 SNRPNP63162 240 aaKnown RBP9.65□□□□□ -0.86
SF3A3-204ENST00000462258 EEF1A2Q05639 463 aaKnown RBP9.65□□□□□ -0.86
SF3A3-204ENST00000462258 CKAP4Q07065 602 aaKnown RBP9.65□□□□□ -0.86
SF3A3-204ENST00000462258 ILF2Q12905 390 aaKnown RBP9.65□□□□□ -0.86
SF3A3-204ENST00000462258 ZXDCQ2QGD7 858 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-204ENST00000462258 TMEM214Q6NUQ4 689 aaKnown RBP9.65□□□□□ -0.86
SF3A3-204ENST00000462258 IGFL3Q6UXB1 125 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 PRSS41Q7RTY9 318 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 ZNF572Q7Z3I7 529 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-204ENST00000462258 ADAMTSL2Q86TH1 951 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 LAPTM4BQ86VI4 370 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 CEP97Q8IW35 865 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 CAMKVQ8NCB2 501 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 ABHD11Q8NFV4 315 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 OR9A4Q8NGU2 314 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 SLC5A11Q8WWX8 675 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 OR4K3Q96R72 315 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 EGFL8Q99944 293 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 MACROD1Q9BQ69 325 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 MCMBPQ9BTE3 642 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 TGIF2Q9GZN2 237 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 LHPPQ9H008 270 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 ILKAPQ9H0C8 392 aaPredicted RBP9.65□□□□□ -0.86
SF3A3-204ENST00000462258 ZNF160Q9HCG1 818 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 GPAMQ9HCL2 828 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 TXNDC16Q9P2K2 825 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 B3GNT3Q9Y2A9 372 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 OARD1Q9Y530 152 aa9.65□□□□□ -0.86
SF3A3-204ENST00000462258 SCN3AQ9NY46 2000 aa9.65□□□□□ -0.87
SF3A3-204ENST00000462258 PRRC2CQ9Y520 2896 aaKnown RBP9.64□□□□□ -0.87
SF3A3-204ENST00000462258 NSG1A0A0A6YYJ2 146 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 A0A1W2PQ72 361 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 CXorf49A8MYA2 514 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-204ENST00000462258 H0YIG0 161 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 PCDH17O14917 1159 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 NDUFS4O43181 175 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 VPS4BO75351 444 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 RDH16O75452 317 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 HEXBP07686 556 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 NPPBP16860 134 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 CXCR2P25025 360 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 UQCRFS1P47985 274 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 EMP2P54851 167 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 PLTPP55058 493 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 CDKL1Q00532 357 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 REEP5Q00765 189 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 MEF2AQ02078 507 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-204ENST00000462258 CAV1Q03135 178 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 TSNQ15631 228 aaKnown RBP9.64□□□□□ -0.87
SF3A3-204ENST00000462258 AGAP7PQ5VUJ5 663 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 FAAH2Q6GMR7 532 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 C8orf74Q6P047 294 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 TMPRSS11BQ86T26 416 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 CCDC25Q86WR0 208 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 PARP9Q8IXQ6 854 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 IQCKQ8N0W5 287 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 ZADH2Q8N4Q0 377 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 TBC1D19Q8N5T2 526 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 MFSD9Q8NBP5 474 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 FBXO25Q8TCJ0 367 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 PPP4R1Q8TF05 950 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 ANKRD49Q8WVL7 239 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 SLC13A3Q8WWT9 602 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 ANKRD7Q92527 254 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 NEIL2Q969S2 332 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 TM4SF19Q96DZ7 209 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 TSPAN17Q96FV3 270 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 THOC3Q96J01 351 aaKnown RBP9.64□□□□□ -0.87
SF3A3-204ENST00000462258 C16orf45Q96MC5 204 aaPredicted RBP9.64□□□□□ -0.87
SF3A3-204ENST00000462258 TSNARE1Q96NA8 513 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 AGAP4Q96P64 663 aa9.64□□□□□ -0.87
SF3A3-204ENST00000462258 RBBP8Q99708 897 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms