RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CNTN1Q12860 1018 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 DRAP1Q14919 205 aaPredicted RBP4.75□□□□□ -1.65
COPS3-204ENST00000462236 CDKN3Q16667 212 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 SGSM1Q2NKQ1 1148 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 TPRG1LQ5T0D9 272 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 PXDC1Q5TGL8 231 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 ZNF626Q68DY1 528 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 SPOPLQ6IQ16 392 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 IL20RBQ6UXL0 311 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 PRSS45Q7RTY3 260 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 VASH2Q86V25 355 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 PIGZQ86VD9 579 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 CCDC25Q86WR0 208 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 HEATR4Q86WZ0 1026 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 HORMAD1Q86X24 394 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 SLC35F3Q8IY50 421 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 APCDD1Q8J025 514 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 GHDCQ8N2G8 530 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 ARHGAP18Q8N392 663 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 DPP10Q8N608 796 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 FAM184AQ8NB25 1140 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 C11orf65Q8NCR3 313 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 PPHLN1Q8NEY8 458 aaKnown RBP4.75□□□□□ -1.65
COPS3-204ENST00000462236 NFKBIDQ8NI38 313 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 NDRG1Q92597 394 aaKnown RBP4.75□□□□□ -1.65
COPS3-204ENST00000462236 TAF4BQ92750 862 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 JAKMIP2Q96AA8 810 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 CCDC127Q96BQ5 260 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 ELP4Q96EB1 424 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 ALG14Q96F25 216 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 SPAG5Q96R06 1193 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 ABCG4Q9H172 646 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 CYP3A43Q9HB55 503 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 APOBEC3GQ9HC16 384 aaKnown RBP4.75□□□□□ -1.65
COPS3-204ENST00000462236 PANK4Q9NVE7 773 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 NCOA6Q14686 2063 aaPredicted RBP4.75□□□□□ -1.65
COPS3-204ENST00000462236 CSPG4Q6UVK1 2322 aa4.75□□□□□ -1.65
COPS3-204ENST00000462236 MAP1AP78559 2803 aaPredicted RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 INTS1Q8N201 2190 aaKnown RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 A0A0G2JK05 382 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 CPED1A4D0V7 1026 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 YJEFN3A6XGL0 299 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 B4E171 279 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 D6RAR5 112 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 E7ENQ6 273 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 LMO7DNF2Z398 122 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 RNF103O00237 685 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 TULP2O00295 520 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 MCF2LO15068 1137 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 CLIC2O15247 247 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 SLC31A1O15431 190 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 AQP9O43315 295 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 ADAP00813 363 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 IL1AP01583 271 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 IL1BP01584 269 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 RPN1P04843 607 aaKnown RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 CTSLP07711 333 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 PRLRP16471 622 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 HNRNPA2B1P22626 353 aaKnown RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 CD82P27701 267 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 ETV5P41161 510 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 TSPAN7P41732 249 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 GPR12P47775 334 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 STK19P49842 368 aaPredicted RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 RPS24P62847 133 aaKnown RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 GALNT2Q10471 571 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 PTP4A2Q12974 167 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 EIF4EBP2Q13542 120 aaPredicted RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 SMTNL2Q2TAL5 461 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 POM121L1PQ3SYA9 428 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 MS4A13Q5J8X5 152 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 MANEAQ5SRI9 462 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 C6orf10Q5SRN2 563 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 BSPRYQ5W0U4 402 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 ARHGAP17Q68EM7 881 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 CAPRIN2Q6IMN6 1127 aaKnown RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 RRM2BQ7LG56 351 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 MFN1Q8IWA4 741 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 FBXO39Q8N4B4 442 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 ARFGAP1Q8N6T3 406 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 ANKRD52Q8NB46 1076 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 SLC4A11Q8NBS3 891 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 HJURPQ8NCD3 748 aaPredicted RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 NAT6Q93015 286 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 RPL36ALQ969Q0 106 aaKnown RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 C7orf26Q96N11 449 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 KLF6Q99612 283 aaPredicted RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 CCDC3Q9BQI4 270 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 ULBP1Q9BZM6 244 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 FZD3Q9NPG1 666 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 SEMA4BQ9NPR2 832 aaPredicted RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 CGNQ9P2M7 1197 aaKnown RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 FBXO2Q9UK22 296 aaPredicted RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 SRPRBQ9Y5M8 271 aaKnown RBP4.74□□□□□ -1.65
COPS3-204ENST00000462236 OR51B4Q9Y5P0 310 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 NUP210LQ5VU65 1888 aa4.74□□□□□ -1.65
COPS3-204ENST00000462236 SNRNP200O75643 2136 aaKnown RBP4.73□□□□□ -1.65
COPS3-204ENST00000462236 PRRC2AP48634 2157 aaKnown RBP4.73□□□□□ -1.65
COPS3-204ENST00000462236 ARHGAP10A1A4S6 786 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms