RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 HCAR2Q8TDS4 363 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 HSH2DQ96JZ2 352 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 PRICKLE1Q96MT3 831 aaPredicted RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 ITPAQ9BY32 194 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 NANSQ9NR45 359 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 TAS2R1Q9NYW7 299 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 FLRT1Q9NZU1 646 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 C11orf98E9PRG8 122 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 ITGA10O75578 1167 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 PRLP01236 227 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 TAS2R50P59544 299 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 FAM110CQ1W6H9 321 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 PIGWQ7Z7B1 504 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 MND1Q9BWT6 205 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 DCSTAMPQ9H295 470 aa19.12■□□□□ 0.65
SNX27-204ENST00000458013 POLMQ9NP87 494 aaPredicted RBP19.12■□□□□ 0.65
SNX27-204ENST00000458013 CARNS1A5YM72 827 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 TM4SF1P30408 202 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 MAP2K4P45985 399 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 CDKL4Q5MAI5 379 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 LRRC69Q6ZNQ3 347 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 DNAJB7Q7Z6W7 309 aaPredicted RBP19.11■□□□□ 0.65
SNX27-204ENST00000458013 IGSF9Q9P2J2 1179 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 TNFP01375 233 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 TFPTP0C1Z6 253 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 TPRG1LQ5T0D9 272 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 SLC29A4Q7RTT9 530 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 PLCZ1Q86YW0 608 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 OR51I1Q9H343 314 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 SOX17Q9H6I2 414 aaPredicted RBP19.11■□□□□ 0.65
SNX27-204ENST00000458013 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.11■□□□□ 0.65
SNX27-204ENST00000458013 WDR4P57081 412 aaKnown RBP19.11■□□□□ 0.65
SNX27-204ENST00000458013 DUOXA1Q1HG43 343 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 PAQR7Q86WK9 346 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 GJD3Q8N144 294 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 CLDN19Q8N6F1 224 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 THAP3Q8WTV1 239 aaPredicted RBP19.11■□□□□ 0.65
SNX27-204ENST00000458013 CMAHPQ9Y471 501 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 PLD2O14939 933 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 CD2P06729 351 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 TWNKQ96RR1 684 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 SLC7A8Q9UHI5 535 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 MEMO1Q9Y316 297 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 ALG5Q9Y673 324 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 ATF6P18850 670 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 LRRC66Q68CR7 880 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 FBXL22Q6P050 247 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 XKRXQ6PP77 449 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 NUDT13Q86X67 352 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 GLIS1Q8NBF1 620 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 PLA2G15Q8NCC3 412 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 PCBD2Q9H0N5 130 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 ZDHHC3Q9NYG2 299 aa19.11■□□□□ 0.65
SNX27-204ENST00000458013 RABL3Q5HYI8 236 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 DENND6BQ8NEG7 585 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 COQ8AQ8NI60 647 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 NCSTNQ92542 709 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 ZNF641Q96N77 438 aaPredicted RBP19.1■□□□□ 0.65
SNX27-204ENST00000458013 RC3H2Q9HBD1 1191 aaKnown RBP19.1■□□□□ 0.65
SNX27-204ENST00000458013 NOP16Q9Y3C1 178 aaKnown RBP19.1■□□□□ 0.65
SNX27-204ENST00000458013 ST14Q9Y5Y6 855 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 CSF2P04141 144 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 C15orf52Q6ZUT6 534 aaKnown RBP19.1■□□□□ 0.65
SNX27-204ENST00000458013 GPAT4Q86UL3 456 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 TMEM168Q9H0V1 697 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 NOX1Q9Y5S8 564 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 AHSGP02765 367 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 RHDQ02161 417 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 RPA4Q13156 261 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 TEAD2Q15562 447 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 ANKDD1AQ495B1 522 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 MINDY2Q8NBR6 621 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 RAB2BQ8WUD1 216 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 TMCO6Q96DC7 493 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 UCK2Q9BZX2 261 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 MRPL15Q9P015 296 aaKnown RBP19.1■□□□□ 0.65
SNX27-204ENST00000458013 ZNF860A6NHJ4 632 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 SLC7A4O43246 635 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 LDOC1O95751 146 aaPredicted RBP19.1■□□□□ 0.65
SNX27-204ENST00000458013 H1F0P07305 194 aaKnown RBP19.1■□□□□ 0.65
SNX27-204ENST00000458013 MPP2Q14168 576 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 ZNF527Q8NB42 609 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 TSTD1Q8NFU3 115 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 RAB8BQ92930 207 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 CKMT1AP12532 417 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 EDNRBP24530 442 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 GXYLT1Q4G148 440 aa19.1■□□□□ 0.65
SNX27-204ENST00000458013 NUSAP1Q9BXS6 441 aaKnown RBP19.1■□□□□ 0.65
SNX27-204ENST00000458013 CSTBP04080 98 aaKnown RBP19.09■□□□□ 0.65
SNX27-204ENST00000458013 METTL21CQ5VZV1 264 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 CD300LFQ8TDQ1 290 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 PTGDR2Q9Y5Y4 395 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 PI15O43692 258 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 DUSP11O75319 330 aaKnown RBP19.09■□□□□ 0.65
SNX27-204ENST00000458013 PAX3P23760 479 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 KCNC4Q03721 635 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 HNRNPDQ14103 355 aaKnown RBP19.09■□□□□ 0.65
SNX27-204ENST00000458013 ITGB1BP2Q9UKP3 347 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 ARHGAP40Q5TG30 622 aa19.09■□□□□ 0.65
SNX27-204ENST00000458013 SEC14L1Q92503 715 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms