RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TLE1Q04724 770 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 ZNF385CQ66K41 422 aaPredicted RBP16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 FCRL6Q6DN72 434 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 FIGLAQ6QHK4 219 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 ISCA2Q86U28 154 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 GPSM1Q86YR5 675 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 MCATQ8IVS2 390 aaKnown RBP16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 FBXO15Q8NCQ5 510 aaPredicted RBP16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 TCP10LQ8TDR4 215 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 DENND1AQ8TEH3 1009 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 THAP4Q8WY91 577 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 SLC22A18Q96BI1 424 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 GPR78Q96P69 363 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 UNKQ9C0B0 810 aaKnown RBP16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 CHRNA10Q9GZZ6 450 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 ALG9Q9H6U8 611 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 NKIRAS1Q9NYS0 192 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 TMEM216Q9P0N5 145 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 PLLPQ9Y342 182 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 OARD1Q9Y530 152 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 AP1M2Q9Y6Q5 423 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 C9J4A7 227 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 CDC7O00311 574 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 ZSCAN9O15535 394 aaPredicted RBP16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 PRICKLE3O43900 615 aaPredicted RBP16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 TYROBPO43914 113 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 KERAO60938 352 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 SMIM24O75264 130 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 CREB1P16220 341 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 GMPRP36959 345 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 SLC18A1P54219 525 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 AP1S2P56377 157 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 FOXL2P58012 376 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 KCNC4Q03721 635 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 FASTKQ14296 549 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 NCF4Q15080 339 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 TSNQ15631 228 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 TECRLQ5HYJ1 363 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 RHBDD2Q6NTF9 364 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 APLFQ8IW19 511 aaPredicted RBP16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 RDH11Q8TC12 318 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 ADAMTS17Q8TE56 1095 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 MIPEPQ99797 713 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 NSRP1Q9H0G5 558 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 ACSS2Q9NR19 701 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 TXLNGQ9NUQ3 528 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 INTS9Q9NV88 658 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 ZNF358Q9NW07 568 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 XPR1Q9UBH6 696 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 ANKRD12Q6UB98 2062 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 BSNQ9UPA5 3926 aa16.31■□□□□ 0.2
PRPF40A-204ENST00000450303 ZNF839A8K0R7 811 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 FAM107AO95990 144 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 PDGFAP04085 211 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 ANXA5P08758 320 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 ALAS2P22557 587 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 YBX1P67809 324 aaKnown RBP16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 CDKL1Q00532 357 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 CDKL4Q5MAI5 379 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 TCTN3Q6NUS6 607 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 TLDC1Q6P9B6 456 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 ASB18Q6ZVZ8 466 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 TMEM151BQ8IW70 566 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 TCAIMQ8N3R3 496 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 DYDC1Q8WWB3 177 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 SREK1Q8WXA9 508 aaKnown RBP16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 ATL1Q8WXF7 558 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 PTERQ96BW5 349 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 CCDC126Q96EE4 140 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 CCDC138Q96M89 665 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 GBP5Q96PP8 586 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 EGFL8Q99944 293 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 DPH2Q9BQC3 489 aaPredicted RBP16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 NDC1Q9BTX1 674 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 RAB11FIP5Q9BXF6 653 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 ING2Q9H160 280 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 INTS7Q9NVH2 962 aaKnown RBP16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 NUDT4Q9NZJ9 180 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 CD274Q9NZQ7 290 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 GPN3Q9UHW5 284 aaPredicted RBP16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 ADAMTS6Q9UKP5 1117 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 PCSK5Q92824 1860 aa16.3■□□□□ 0.2
PRPF40A-204ENST00000450303 A0A1W2PPV9 198 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 TMEM120BA0PK00 339 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 ARHGEF33A8MVX0 844 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 SUPT3HB4E1H0 165 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 NRP2O60462 931 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 PLIN3O60664 434 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 SUPT3HO75486 399 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 PROCP04070 461 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 OTX2P32243 289 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 RPA3P35244 121 aaPredicted RBP16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 HSD17B2P37059 387 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 DCDP81605 110 aaKnown RBP16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 TSTA3Q13630 321 aaPredicted RBP16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 TGFBIQ15582 683 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 OR4D1Q15615 310 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 SBSNQ6UWP8 590 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 TTLL10Q6ZVT0 673 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms