RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 LRRC66Q68CR7 880 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 NADSYN1Q6IA69 706 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 KIAA0930Q6ICG6 404 aaPredicted RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 SCIMPQ6UWF3 145 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 ZNF704Q6ZNC4 412 aaPredicted RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 PDZD4Q76G19 769 aaPredicted RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 ZSWIM9Q86XI8 627 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 RYBPQ8N488 228 aaPredicted RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 CEP76Q8TAP6 659 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 NETO1Q8TDF5 533 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 SLC35F5Q8WV83 523 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 ATOH1Q92858 354 aaPredicted RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 POP5Q969H6 163 aaKnown RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 KIAA1143Q96AT1 154 aaPredicted RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 PABPC5Q96DU9 382 aaKnown RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 RBP7Q96R05 134 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 OR5M11Q96RB7 305 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 RTP3Q9BQQ7 232 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 NT5C1AQ9BXI3 368 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 NUSAP1Q9BXS6 441 aaKnown RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 PDGFDQ9GZP0 370 aaPredicted RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 MS4A7Q9GZW8 240 aaPredicted RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 ZFP64Q9NPA5 681 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 NDRG2Q9UN36 371 aaKnown RBP8.35□□□□□ -1.07
LSM5-208ENST00000450169 SESN1Q9Y6P5 492 aa8.35□□□□□ -1.07
LSM5-208ENST00000450169 A0A1W2PPL8 197 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 IFRD1O00458 451 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 PLOD3O60568 738 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 MSCO60682 206 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 RNGTTO60942 597 aaKnown RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 LDOC1O95751 146 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 NFICP08651 508 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 FAM157BP0CG42 384 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CRKP46108 304 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CLCN3P51790 818 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 PTPN5P54829 565 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CDKN2DP55273 166 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 SSX1Q16384 188 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 HSD17B12Q53GQ0 312 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ALFQ53S48 1182 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 INO80DQ53TQ3 878 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 PIM3Q86V86 326 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 GJD3Q8N144 294 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ZNF784Q8NCA9 323 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 SRFBP1Q8NEF9 429 aaKnown RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 NUDT8Q8WV74 236 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 SMG7Q92540 1137 aaKnown RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 COPS5Q92905 334 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 INTS12Q96CB8 462 aaKnown RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 ZBED6CLQ96FA7 236 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 EXOC2Q96KP1 924 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ZNF599Q96NL3 588 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 SERPINB11Q96P15 392 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 PPP1R2P1Q96PQ5 205 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 GMLQ99445 158 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 TBL1YQ9BQ87 522 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 PDCD2LQ9BRP1 358 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 GSX2Q9BZM3 304 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 MIXL1Q9H2W2 232 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 TREX1Q9NSU2 369 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 LYARQ9NX58 379 aaKnown RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 KLK14Q9P0G3 267 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CYB5R1Q9UHQ9 305 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ZNF112Q9UJU3 913 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ADAM30Q9UKF2 790 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 LIPT1Q9Y234 373 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 STON1Q9Y6Q2 735 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 MIA3Q5JRA6 1907 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 A0A1W2PQL4 384 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 E9PQ18 207 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 WWP2O00308 870 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 PSMD3O43242 534 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 LYRM1O43325 122 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CHP2O43745 196 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 HCN1O60741 890 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 OR4F21O95013 312 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 WISP3O95389 354 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 MPC2O95563 127 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 HLA-DQB1P01920 261 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CXCL8P10145 99 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 SLC2A2P11168 524 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 SLC2A3P11169 496 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 MTHFD2P13995 350 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 SLC2A4P14672 509 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CD1DP15813 335 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 LHCGRP22888 699 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 POU1F1P28069 291 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CHRNA5P30532 468 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 SULT1E1P49888 294 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ZNF81P51508 661 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ABATP80404 500 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 FOXK2Q01167 660 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 FAM171A1Q5VUB5 890 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 OR4F3Q6IEY1 312 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ZNF549Q6P9A3 640 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CORO6Q6QEF8 472 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 GCNT7Q6ZNI0 430 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 RTL4Q6ZR62 310 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms