RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 GMPRP36959 345 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 HNMTP50135 292 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 RPS15AP62244 130 aaKnown RBP13.89□□□□□ -0.19
USP39-206ENST00000448971 IL10RAQ13651 578 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 TGFBIQ15582 683 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 MUM1Q2TAK8 710 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 FAM214AQ32MH5 1076 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 NKAIN1Q4KMZ8 207 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 ASB18Q6ZVZ8 466 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 TMPRSS11BQ86T26 416 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 ATCAYQ86WG3 371 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 GPSM1Q86YR5 675 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 SLC5A11Q8WWX8 675 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 FUT8Q9BYC5 575 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 NPDC1Q9NQX5 325 aaPredicted RBP13.89□□□□□ -0.19
USP39-206ENST00000448971 CD274Q9NZQ7 290 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 TLK1Q9UKI8 766 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 TCFL5Q9UL49 500 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 POLHQ9Y253 713 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 RUVBL1Q9Y265 456 aaKnown RBP13.89□□□□□ -0.19
USP39-206ENST00000448971 TNRC6AQ8NDV7 1962 aaKnown RBP13.89□□□□□ -0.19
USP39-206ENST00000448971 CRYBG3Q68DQ2 2970 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 A0A087X1B8 175 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 FEZF1A0PJY2 475 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 SUPT3HB4E1H0 165 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 TXNDC9O14530 226 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 SUPT3HO75486 399 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 STATHP02808 62 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 LTA4HP09960 611 aaKnown RBP13.88□□□□□ -0.19
USP39-206ENST00000448971 PIM1P11309 404 aaPredicted RBP13.88□□□□□ -0.19
USP39-206ENST00000448971 TFEBP19484 476 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 FOLR3P41439 243 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 MSH2P43246 934 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 GCGRP47871 477 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 CCR8P51685 355 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 PMS2P54278 862 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 CSNK1G2P78368 415 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 IRF9Q00978 393 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 OR4D1Q15615 310 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 UGT8Q16880 541 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 HKDC1Q2TB90 917 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 FAM69BQ5VUD6 431 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 FBXO42Q6P3S6 717 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 TRMT10CQ7L0Y3 403 aaKnown RBP13.88□□□□□ -0.19
USP39-206ENST00000448971 THOC6Q86W42 341 aaKnown RBP13.88□□□□□ -0.19
USP39-206ENST00000448971 TCAIMQ8N3R3 496 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 TBC1D19Q8N5T2 526 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 KCTD4Q8WVF5 259 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 SLC44A1Q8WWI5 657 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 PTERQ96BW5 349 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 C10orf90Q96M02 699 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 OR2A5Q96R48 311 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 OR4K3Q96R72 315 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 ALG9Q9H6U8 611 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 SYNPO2LQ9H987 977 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 NMRAL1Q9HBL8 299 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 SLC22A14Q9Y267 594 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 ACOT9Q9Y305 439 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 PTRH2Q9Y3E5 179 aaKnown RBP13.88□□□□□ -0.19
USP39-206ENST00000448971 MAU2Q9Y6X3 613 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 CELSR2Q9HCU4 2923 aa13.88□□□□□ -0.19
USP39-206ENST00000448971 A0A096LPK6 155 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 P2RX6O15547 441 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 ZNF500O60304 480 aaPredicted RBP13.87□□□□□ -0.19
USP39-206ENST00000448971 KRT38O76015 456 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 CAPN1P07384 714 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 ABHD2P08910 425 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 CD63P08962 238 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 NPPBP16860 134 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 TYK2P29597 1187 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 BCL6P41182 706 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 UQCRFS1P47985 274 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 SERPINB9P50453 376 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 MEF2AQ02078 507 aaPredicted RBP13.87□□□□□ -0.19
USP39-206ENST00000448971 RELAQ04206 551 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 NDUFA9Q16795 377 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 ZXDCQ2QGD7 858 aaPredicted RBP13.87□□□□□ -0.19
USP39-206ENST00000448971 PRTGQ2VWP7 1150 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 C18orf21Q32NC0 220 aaPredicted RBP13.87□□□□□ -0.19
USP39-206ENST00000448971 KLC3Q6P597 504 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 CCDC91Q7Z6B0 441 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 RAB43Q86YS6 212 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 APLFQ8IW19 511 aaPredicted RBP13.87□□□□□ -0.19
USP39-206ENST00000448971 DTWD1Q8N5C7 304 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 ZNF454Q8N9F8 522 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 STAG3L4Q8TBR4 150 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 NEIL2Q969S2 332 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 KIAA1191Q96A73 305 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 FKBP10Q96AY3 582 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 RHBDF1Q96CC6 855 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 UBXN10Q96LJ8 280 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 TMEM79Q9BSE2 394 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 VPS11Q9H270 941 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 CNOT10Q9H9A5 744 aaKnown RBP13.87□□□□□ -0.19
USP39-206ENST00000448971 NUDT4Q9NZJ9 180 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 PLEKHB1Q9UF11 243 aaPredicted RBP13.87□□□□□ -0.19
USP39-206ENST00000448971 KCNE2Q9Y6J6 123 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 SPTBP11277 2137 aa13.87□□□□□ -0.19
USP39-206ENST00000448971 PRPF4O43172 522 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP39-206ENST00000448971 RIPK2O43353 540 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms